KEGG   Kangiella geojedonensis: TQ33_1850
Entry
TQ33_1850         CDS       T03889                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
kge  Kangiella geojedonensis
Pathway
kge02024  Quorum sensing
kge03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kge00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    TQ33_1850
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    TQ33_1850
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kge03019]
    TQ33_1850
   03036 Chromosome and associated proteins [BR:kge03036]
    TQ33_1850
Messenger RNA biogenesis [BR:kge03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     TQ33_1850
Chromosome and associated proteins [BR:kge03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    TQ33_1850
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AKE52788
UniProt: A0A0F6RCW6
Position
complement(2062337..2062690)
AA seq 117 aa
MSKGQSLQDPFLNALRREKVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPIRNVRSHYQNENGGSREDQGSQGGMGSSGGMGGPMSSGSGGGGGYTGGPMGGL
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtcaaaagggcaatcactacaagaccctttcttgaacgcacttagacgcgagaaagta
cccgtatcgatttacttggttaatggcattaagctacagggccaaatcgaatcttttgac
caattcgtcattttgttaaagaacactgtgagtcagatggtttataagcatgccatttca
acggttgtgcctatccgcaatgttcgtagtcattaccaaaatgaaaatggtggatcacgc
gaagaccaaggcagccaagggggcatgggtagctctggtggcatgggtggcccaatgtcg
agcggctcaggtggcggtggtggatacacaggtggcccaatgggcggtctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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