KEGG   Kerstersia gyiorum: EHF36_00550
Entry
EHF36_00550       CDS       T05924                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
kgy  Kerstersia gyiorum
Pathway
kgy02020  Two-component system
kgy02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:kgy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EHF36_00550 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    EHF36_00550 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kgy03021]
    EHF36_00550 (rpoN)
Transcription machinery [BR:kgy03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EHF36_00550 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR HTH_38 HTH_3 HTH_23 HTH_5
Other DBs
NCBI-ProteinID: QBR39288
Position
146466..147851
AA seq 461 aa
MIRPALEIRQSQQLVLTPQLQQALRLLQLSSLDLQQEISQALTENPVLELESPEPAAESV
AAEDLFSGGGGPRQDGDDDFFPEAAATPSLREHLLGQISCTRASRRDLALMTVLIDELDD
NGYLAASFEEILAYLPESLEVEQGELEAALALLQNMEPAGIAARTMSECLLLQLRQPDAK
VWPEARDAAIVALARRLCERHLDALAAGRLAFLCEELKCSPAEVRTAHALIRRLDPYPGR
AWTVPVADFAVPDVIAYRSGNGWRVRLNGDLVPRLSVNDAYVQALGQEPRGSYEGLQSHV
QQARWLIRQVAQRFDTLLRVSTEIVMRQQAFFESGMVALRPMVLREIAEALGMHESTISR
ATSSKYMATPHGTLELKRFFSTGVPAADGESASAASIQAMMREMLDQEDPRKPLSDSQLM
AKLAERGVELARRTVAKYREGMRVPTASQRKAMALMRMDDC
NT seq 1386 nt   +upstreamnt  +downstreamnt
atgatacgacccgcgctggaaattcgccaaagtcagcagttggtgctgacgccacagttg
caacaggccttgcgtctcttgcaactgtcgtcgctggacctgcaacaggaaatctcgcag
gcgctgacggaaaacccggttctggagctggaatcccccgaacccgccgctgagtcggtg
gcggccgaggatctgttttccggaggcggcggcccgcgccaggacggcgacgacgatttt
ttccccgaggctgccgccacgccgtcgctgcgcgagcacctgctggggcagatttcctgt
acccgtgccagccgtcgtgacctcgcgctgatgaccgtgctgatcgacgaattggacgat
aacggctatcttgcggccagtttcgaggaaatcctggcctatttgccggaatcgctcgag
gttgaacagggcgaactggaagcggcactggccttgctgcagaatatggagccggccggt
attgccgcccgcacgatgtccgaatgcctgctgctgcaattgcggcagccggatgccaag
gtctggcccgaggcccgcgacgctgccattgtggcgctggcgcggcgcctgtgcgagagg
catctggacgccctggcggcgggccggcttgctttcctgtgcgaggaattgaagtgttcg
ccggccgaggtgcgtaccgcgcacgccctgatccggcggttggacccttacccgggccgg
gcctggacggtgccggtggcggattttgcggttccggacgtgatcgcttaccgtagcggc
aatggctggcgtgttcgcctgaatggcgacctagtgccgcgcctgagcgtgaatgatgcc
tatgtgcaggctctggggcaggagccgcgcggcagttacgagggcctgcagtcccatgtg
cagcaggcgcgctggctgatccgacaggtagcgcagcgcttcgatacgctgctgcgcgtc
tctaccgagatcgtgatgcggcagcaggctttcttcgaatccggcatggtggcgttgcgg
ccgatggtgctgcgcgagatcgccgaggccttgggcatgcacgagtccacgatatcgcgg
gcgacctccagcaagtacatggcgacgccgcacggcacgctggagctcaagcggtttttc
agtaccggcgtgccggcagccgatggcgagtcggcttctgcggcgtcgattcaggcgatg
atgcgtgaaatgctggatcaggaagatccgcgcaagccgctgtccgatagccagctgatg
gccaagctggccgagcgcggtgtcgagctggcgcgccgcacggttgccaagtaccgggaa
ggcatgagagtgcctacggcttcgcagcgcaaggccatggccttgatgcgtatggatgat
tgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (8)   
   Pfam (8)   
All databases (15)   

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