KEGG T06042: NCTC12125

Kluyvera intermedia: NCTC12125_02277

Entry

NCTC12125_02277   CDS       T06042

Symbol

phrB

Name

(GenBank) Deoxyribodipyrimidine photo-lyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

kie Kluyvera intermedia

Brite

KEGG Orthology (KO) [BR:kie00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kie03400]
    NCTC12125_02277 (phrB)
Enzymes [BR:kie01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     NCTC12125_02277 (phrB)
DNA repair and recombination proteins [BR:kie03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    NCTC12125_02277 (phrB)
Prokaryotic type
    NCTC12125_02277 (phrB)

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

VDZ84167

Position

1:complement(2071444..2072865)

AA seq 473 aa
MSTHLVWFRADLRLHDNLALAAACRDVNAQVLALFIATPQQWAAHTMAPRQAAYIAAQLN
ALRQALAEKNIPLIFEEADDFTASVETVKRVCLQYEVTDLFYNYQYEFNERQRDVAVERS
LKDTVCQGFDDSVILPPGSVMTGNYEMYKVFTPYKNAWLRRLREHMPECVRAPAARNAQA
VSDVSTITLNYPHQPFDPALFPADENAAIQQLRQFCQQSAAEYEAQRDFPAIEGTSRLSA
CLAVGVLSPRQCLHRLLAEQPTALDGGAGSVWLNELIWREFYRHLMTYYPRLCKHRPFID
WTDNVRWQDVPDALTAWKEGKTGYPIVDAAMRQLNETGWMHNRLRMIVASFLVKDLLVDW
REGERYFMSQLVDGCLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDKSGAFIQYWL
PELEKVPEKFIHQPWAWADKQGIELTYPRPIVDHAQARVATLAAYETAKKQGV

NT seq 1422 nt +upstreamnt +downstreamnt
atgtccacccatctggtctggttccgcgctgatttacgcctgcatgacaatcttgccctt
gccgccgcctgtcgcgatgtcaatgcccaggtactggcgctctttatcgctaccccgcaa
cagtgggcagcgcatacaatggccccgcgtcaggcggcctatattgctgcgcaactgaat
gcattacgacaggcgctggcggagaaaaatatcccgcttatttttgaagaagcggatgat
ttcaccgccagcgtggagacggtaaaaagggtctgcctgcaatacgaagtgacggatctc
ttctataactatcaatacgaattcaacgaacgccaacgtgatgtggcggttgagcgatct
ctaaaagacaccgtgtgtcagggctttgatgacagcgtgatcctaccgccggggtcggtg
atgaccggtaactacgagatgtacaaagtgtttacgccgtataaaaatgcctggctgcgt
cgcttgcgcgagcacatgccggaatgcgttcgcgcgcctgcagcacgcaacgctcaagcg
gtaagcgacgtatcaaccatcacgctaaactacccccatcagccgtttgatcctgcgcta
tttcccgcggatgaaaatgcggctattcagcaacttcgtcaattttgccagcagtcggca
gcggaatatgaagctcagcgagattttcccgctatcgaaggaaccagtcgattgtccgct
tgtctggcggtgggtgtcctttcgccacgccagtgcctgcaccgcttgctggcggagcag
cctacagcgctcgacggtggcgcgggtagcgtctggctcaatgagcttatctggcgcgag
ttttatcgccatctgatgacgtattatccacggctgtgcaagcatcgtccgtttattgac
tggacggataatgtgcgctggcaagatgtgccggatgcgctgacggcctggaaagagggg
aaaaccggctacccgatagtcgatgcagctatgcgtcagctaaacgaaaccggctggatg
cataatcggctgcggatgatcgtggccagcttcctggtgaaagacctgctggtcgattgg
cgtgaaggggagcgttattttatgtcgcagctggtggatggttgcctggcggcgaataac
ggtggctggcagtgggcggcgtccaccggtaccgatgcggcaccgtattttcgtatcttc
aacccgaccacgcagggtgaacgctttgataaaagcggggcgtttattcagtattggttg
ccagagctagaaaaagtaccggaaaaatttattcatcaaccgtgggcgtgggccgataag
caagggatcgaactgacctatccgcggccgatcgtcgatcatgcgcaggcaagggtggcg
acgcttgccgcctatgaaacagcaaaaaaacagggtgtttga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (9)   

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