KEGG T06042: NCTC12125

Kluyvera intermedia: NCTC12125_04850

Entry

NCTC12125_04850   CDS       T06042

Symbol

recC

Name

(GenBank) Exodeoxyribonuclease V gamma chain

K03583

exodeoxyribonuclease V gamma subunit [EC:3.1.11.5]

Organism

kie Kluyvera intermedia

Pathway

kie03440

Homologous recombination

Brite

KEGG Orthology (KO) [BR:kie00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NCTC12125_04850 (recC)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kie03400]
    NCTC12125_04850 (recC)
Enzymes [BR:kie01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NCTC12125_04850 (recC)
DNA repair and recombination proteins [BR:kie03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NCTC12125_04850 (recC)

SSDB

Motif

Pfam:

Exonuc_V_gamma RecC_C

Other DBs

NCBI-ProteinID:

VDZ86611

Position

1:4512298..4515669

AA seq 1123 aa
MLRVYHSNRLDVLEALMEFIVEQDRLADPFEPEMILVQSTGMAQWLQMTLSTRFGIAANI
DFPLPASFIWDMFTRVLPEIPGESAFNKQSMSWKLMTLLPGMLDNEAFTPLRHYLTDDAD
KRKLFQLASRVADLYDQYLVYRPQWLTQWEAGELVDGVGDAQQWQAPLWKALVEHTAALG
QPLWHRANLYQRFIDTLEKSSEPPAGLPSRVFICGISALPPVYLQALQALGKHVDIYVLF
TNPCRYYWGDIKDPAFLARLLARQRRHYREQRELPLFQDTTSAPGLFNDDGEQDVGNPML
ASWGKLGRDYIYLLAGLERYQELDAFVDIEPDNLLHNVQYDVLELKNGAVAGRTAEEFAS
SVDKRPLASDDRSLTVHVCHSPQREVEILHDQLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSATGERYLPYAISDRRARQAHPAMQAFITLLSLPDSRFTSEDVLALLDVPVLA
ARFNVDEAGLLHLRQWVNESGVRWGMDDDNVRELDLPATGQHTWRFGLTRMLLGYAMESR
EGEWQDVLPYDESSGLIAELVGHLASLLMQLNRWRQVLTQSRTLDEWLPVCRDMLNDFFL
PDQDTEAALTLIEQQWQAIIAQGVQSQYEGEVPLSLLRDELAQRLDQERISQRFLAGPIN
ICTLMPMRSIPFKVVCLLGMNDGIYPRALAPLGFDLMSQKPLRGDRSRRDDDRYLFLEAM
MSAEKALYISYIGRSIQDNSERYPSVLVQELLDYIGQSHCLEGDEGLNCDESERRVKNHI
MHQHTRMPFDAENYQANEQQSYAREWLAAASQQGEAHADFIQPLAPLEFTTLTLEQLQRF
WRHPVRAFFQMRLQVNFRSEESDIPDTEPFTLEGLTRYQLNQQLLNTLIEQQEPEPMYRR
YRAAGELPYGPFGEIAWEAQRLEMAALADRVIECRRAGQNMEIDLDCAGVNITGWLPQVQ
DNGLLRWRPSLLSVSQGMQLWLEHLVYCASGGNGESRLLLRKEGEWCFPALCVDEAKAYL
EQLVEGYRQGMCQPLLFLPESGGAWIKACYDAQNDAILRDDDSLQKARSKFLQAYEGNMV
VRGEGADVWYQRLWRTLEPAQYEAIIEQTTPYLLPVFRFNQSI

NT seq 3372 nt +upstreamnt +downstreamnt
atgttacgggtctaccactccaaccgtctggatgtgctggaagcattgatggagtttatc
gttgagcaggaccggttggctgacccgttcgagcctgaaatgatccttgtccaaagtacc
gggatggcacagtggctccagatgacgctctctacgcgttttggtattgcggccaatatt
gacttcccgctgcccgcgagctttatctgggatatgttcacccgcgtgctgccggaaatc
cccggtgaaagtgccttcaataagcagagtatgagctggaagctgatgaccctgctgccg
ggcatgctggataacgaagccttcacgccactacgccactatctgactgacgacgccgat
aaacgcaagctgttccagttggcctcccgcgtggccgacctctatgaccaatacctggtc
taccgcccgcagtggctaacacagtgggaggccggtgaattggtcgatggcgtgggcgat
gcgcagcagtggcaagcgccgctgtggaaagcgctggtggagcataccgccgcgctcggc
cagccgttgtggcaccgtgctaacctgtatcaacgctttatcgacaccctggaaaagagt
agtgaaccgcctgccgggttgccgtcgcgggtgtttatttgcggtatctccgcgctgccg
ccggtctatctacaagcactacaggcgctgggcaagcatgtggatatctacgtgctgttc
accaacccttgtcgctactattggggtgatatcaaagacccggcatttctggcgcgcttg
ctggcacgacagcgccgccactaccgtgaacagcgagagctaccgctgttccaggacacc
accagtgcgccggggttatttaacgacgatggcgagcaggacgttggcaacccgatgcta
gcctcctggggcaagctggggcgcgactacatttatctgctggctggattagagcgctat
caggaactggatgcatttgtcgatattgagcccgacaacctgctgcacaatgtgcagtac
gacgtactggaactgaaaaacggtgccgtcgccgggcgcaccgccgaagagtttgccagc
agtgtagataagcgcccgctagcatcagacgaccgcagcctgaccgttcacgtctgccac
agcccgcagcgtgaggtggaaatattacacgaccagctgctggcaatgttagaagcggat
ccaacgctgacgccacgcgatattatcgtcatggtggcggatatcgacagctacagcccg
tttatccaggccgtattcggcagtgctaccggcgaacgctatctaccgtacgccatatcc
gaccgtcgggcacgccaggcgcacccggcaatgcaggcattcatcacgctactgtcgctc
ccggacagtcgttttactagcgaagatgtgctggcgctgcttgatgttccggtgctggcg
gcacgcttcaacgttgatgaagctgggttactgcacctgcgtcagtgggttaatgaatcc
ggcgtacgctggggtatggacgacgataatgtccgcgaactggatcttccggcgaccgga
cagcacacctggcgctttggtctcacacgtatgctgctgggttatgccatggagagccgc
gaaggtgaatggcaggatgtcctgccgtatgacgagtccagcggtctgattgccgagctg
gtcgggcatctggcttcactgctgatgcagcttaaccgctggcgacaagtgctgacgcag
tcgcgcacgctggatgaatggttgccggtatgccgcgatatgctcaacgacttcttcctg
ccagatcaggataccgaagcggcattgacgctcatcgagcagcagtggcaggcgattatc
gcccaaggcgtgcagtcgcagtacgagggcgaagtgccattatcgctgctgcgtgacgaa
ctggcgcagcgtcttgaccaggaacgtattagccaacgcttcctggccgggccaatcaat
atctgtaccctgatgccgatgcgttctatcccattcaaagtggtctgcttgctgggaatg
aacgacggtatctatccgcgcgcgctggctccgctgggctttgacctgatgagccagaag
ccgctgcgcggtgaccgtagtcgtcgtgatgatgaccgctacctgttccttgaggcgatg
atgtcggcggaaaaagcgctctatatcagctatatcggccgctcaattcaggacaacagc
gaacgctatccgtcagtactggtgcaggagctacttgactatataggccaaagccattgc
cttgaaggcgacgaagggctcaactgcgacgagagcgaacggcgggtgaagaaccacatc
atgcaccagcatacccgcatgccgtttgacgctgaaaactaccaggccaatgaacagcaa
agctatgcccgtgagtggttggcagcagcaagccagcagggcgaagcacacgccgatttt
atccagcctctggccccgcttgagttcaccacgctgacattagaacagctccagcgcttc
tggcgtcacccggtgcgcgccttcttccagatgcggctacaggttaacttccgcagcgaa
gagagcgatattcccgacactgagccgttcacgcttgagggcctcacccgctatcagcta
aaccaacagttgctcaatacgctgatcgaacagcaggaacccgagccgatgtaccgccgc
tatcgtgctgcgggtgaactgccgtatggcccatttggtgaaattgcctgggaagcacag
cgcctggagatggccgcgctggctgaccgagtgattgaatgccgtcgcgcggggcagaac
atggaaatcgaccttgattgcgcgggcgttaacatcaccggctggttaccgcaggttcag
gataatggactgttgcgctggcgtccctctctgctgagcgtttcgcaaggaatgcaactt
tggctggaacaccttgtctactgtgctagcggtggcaatggcgaaagccgactgctgctg
agaaaagagggtgagtggtgcttcccagccctttgtgttgatgaagcaaaagcttacttg
gagcagttggttgaaggttatcgtcagggcatgtgtcagccgctactgtttttacccgag
agcggcggggcgtggataaaagcctgttacgatgcccaaaatgatgccatcttaagagac
gacgattcgctgcaaaaagcgcgcagtaaatttttgcaggcgtacgaaggtaatatggtg
gtcaggggtgaaggggccgatgtctggtaccagcgcctgtggcgcactctggagcctgcg
cagtatgaggcgattatcgaacagacaacgccctatctgctccccgtgttccgttttaac
cagtcgatatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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