KEGG   Kluyvera intermedia: NCTC12125_04855
Entry
NCTC12125_04855   CDS       T06042                                 
Symbol
recD
Name
(GenBank) Exodeoxyribonuclease V alpha chain
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
kie  Kluyvera intermedia
Pathway
kie03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kie00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    NCTC12125_04855 (recD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kie03400]
    NCTC12125_04855 (recD)
Enzymes [BR:kie01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     NCTC12125_04855 (recD)
DNA repair and recombination proteins [BR:kie03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     NCTC12125_04855 (recD)
SSDB
Motif
Pfam: RecD_N AAA_19 AAA_30 Helicase_RecD UvrD_C_2 Viral_helicase1 AAA_11 SH3_13 UvrD-helicase AAA_22 SLFN-g3_helicase AAA_16 nSTAND3 AAA_28 T2SSE CbiA SRP54 MukB NTPase_1 AAA_7 UvrD_C AAA DO-GTPase1 DEAD FtsK_SpoIIIE ATPase TrwB_AAD_bind
Other DBs
NCBI-ProteinID: VDZ86616
Position
1:4522280..4524118
AA seq 612 aa
MTLEQRLLEAVELKLLRPLDVQFALMVAQDEHPAVMLAAVMLSRDTGEGHVCLPLSHLTP
AMQPKGRARELWQQLFADAGEPEDWSALLLASQAVSVGERPSPLILSRERLYLNRMWRNE
LTVARFFSDTQAPFAVDEPQLAATLNALFPLSDTVDWQKVAAAVALTRRISVISGGPGTG
KTTTVAKLLAALVQMSGTQKCRIRLAAPTGKAAARLTESLGAALRKLNLSDEQKAMLPSD
ASTLHRLLGAQPGSQKMRYHADNPLHLDVLVVDEASMIDLPMMARLIDALPPHGRVIFLG
DRDQLASVEAGAVLGDICSWVNHGYTAERALELSRLVGADVPAGEGHAASALRDSLCLLR
TSYRFGSDSGIGQLAGAVNRGDKKTVSEVFTRGFSDIELKALRTTDDYAAMLDDARAGYG
HYLQSLRDRADPALVLAAFGEYQILCALREGPWGVSGLNTQFELLLTRHRQIVPQRHSRW
YEGRPVMITRNDSALGLFNGDIGIALDRGQGTRVWFPMPDGTIKSVQPSRLPEHDTAWAM
TVHKSQGSEFTNAALVLPTQIVPVVSRELVYTAITRAKARLSMYADENLLVQAIATRTER
RSGLAAIFAEMT
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgacgctggaacaacgcttattagaagctgtagaactcaagctgctgcgcccgctggac
gtgcagtttgcgctgatggtggcgcaggatgaacatccggcggtgatgctggcggcagtg
atgctcagtcgtgataccggcgaagggcacgtctgtttgccgctctcccatctaacgccc
gcgatgcagccaaaggggcgcgcacgggaactgtggcagcagctctttgccgacgcgggc
gaacctgaagactggtcagcattgttacttgcctcgcaagcggtgagtgtgggtgagcgt
ccatcgccgctgattttgagccgtgagcgtctttatttgaaccgcatgtggcgcaacgaa
ctcaccgtggcacgcttctttagcgacacccaggcgccgtttgccgttgacgagccacag
cttgccgccacgctgaacgcgctgtttccgctcagtgacacggtagactggcagaaggtc
gcagccgccgtggcgctgacgcggcgtatttcggtgatttccggcggccccggcaccggg
aaaaccaccaccgtcgccaaactgctggcggcgctggtccagatgtccggcacacaaaag
tgccgtattcgtttagccgcaccgaccgggaaggccgccgcgcgattaaccgaatcgcta
ggtgctgcgctgcgtaagctcaacctgagtgacgaacaaaaagcgatgctgccgagcgat
gccagcacgctgcaccgcctgttgggcgcacagcccggcagccagaaaatgcgctatcac
gccgataatccgctgcaccttgacgtgctggtggtcgatgaagcctcaatgattgacctg
ccgatgatggcacggttgattgatgcgctgccgccgcatgggcgggtgattttcctcggc
gaccgcgatcaattagcctccgttgaggccggtgccgtgctcggtgatatttgtagctgg
gttaaccacggctataccgcggaacgcgcgcttgagcttagtcgcctcgtcggtgctgac
gtgcctgccggtgaaggacatgcggcaagcgcgctgcgcgacagcctgtgcctgctgcgc
accagctaccgttttggcagcgactcgggcatcgggcaactggccggtgcagtgaaccgg
ggtgataaaaaaacggtgagtgaggtcttcacgcgtgggtttagcgatattgaactcaag
gcgctacgtaccacggacgattacgccgcgatgcttgacgatgcgcgcgcgggctacggt
cattatctccagtcgttgcgtgaccgagccgaccccgcgcttgtgctggcggcgtttggc
gaatatcaaatcctctgcgcgctgcgggaagggccgtggggagttagtgggttgaatacg
cagtttgaactgctgctgacgcgccatcggcagattgtccctcagcgccattctcgctgg
tatgaagggcgtccggtgatgatcactcgtaatgacagcgcgctggggctgtttaacggc
gatattggcattgcgctagaccgagggcaggggacgcgtgtctggttcccgatgccggat
ggcacgattaaatcggtgcagccaagccgcttgcctgagcacgacaccgcctgggcgatg
acggtgcataaatcgcagggttcagaattcaccaatgcagcgctggtgctgccgacgcag
attgtgccagtggtgagccgtgagctggtgtacacggcgattacccgtgcgaaagcgcga
ttgtcgatgtatgccgatgagaatctgctagtgcaggcgattgccacgcgtaccgagcgg
cgtagtgggctggcggcgatttttgcggagatgacgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (27)   
   Pfam (27)   
All databases (35)   

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