KEGG   Kocuria indica: KocCE7_02385
Entry
KocCE7_02385      CDS       T05866                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
kii  Kocuria indica
Brite
KEGG Orthology (KO) [BR:kii00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kii03032]
    KocCE7_02385 (topA)
   03400 DNA repair and recombination proteins [BR:kii03400]
    KocCE7_02385 (topA)
Enzymes [BR:kii01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     KocCE7_02385 (topA)
DNA replication proteins [BR:kii03032]
 Prokaryotic type
  DNA Topoisomerases
   KocCE7_02385 (topA)
DNA repair and recombination proteins [BR:kii03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      KocCE7_02385 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 SBP_bac_3 Rep_1B
Other DBs
NCBI-ProteinID: QBJ20824
UniProt: A0A4P6RMX2
Position
543025..545928
AA seq 967 aa
MASKATKNAGTGKSLLIVESPSKVKTIAGYLGDAYEVESSMGHIRDLPQPSELPTDMKKG
PYGKFAVDVEHEFDPYYVVNPDKKKKVTELKRKLKDADALYLATDGDREGEAIAWHLLQV
LKPKVPVYRLTFPEITREAIERGFAQLREIDQDLVDAQETRRILDRLYGYEISPVLWRKV
SSGLSAGRVQSVATRLVVQRERERIAFVPADYWDLTGTFSRPEGQDTGRAFTARLSSLNG
RRVATGKDFTDRGELKASGQNAPAALDETVATALAAGLQDAEFSVRSLETKPYTRRPAAP
FTTSTLQQEAARKLRFTSRTTMRVAQRLYENGYITYMRTDSVALSDQAVNAARSQAKELY
GAEFVPASKRVYASKSKNAQEAHEAVRPAGDTFRTPSQVRSQLSVDEFKLYELIWKRTVA
SQMEDAKGSTATVRLGATATSAAGEHSGADAEFSASGTVITFRGFLAAYEEGRDVNPDLA
HENSKQSENSEDKRLPVMAEGDALDASEVTADGHTTTPPARYTEASLVKTLDELGIGRPS
TYAATISTIMDRGYVQVRGSALIPSWLAFSVVRLLEEHFSDYVDYDFTAELEEDLDRIAR
GEAERVKWLEGFYFGDTASEPGLKPLVDDLGEIDARAVNSIPVTDEITLRVGKFGPYLET
GGTVDPETGELTDPVRANVPLDLAPDELTPEKARELMEIGKADGRELGVNPDTGRMIVAK
DGRYGPYVTEVIPEPTQEELDAIPTEYYKNGKPKPKKVERPKPNTASLFSSMNLQDITLD
DALKLLSLPRVLGEDTDGETITVQNGRYGPYLKKGSDSRSIGSEDQIFTITLDEAKTIYA
QPKQRGRQAAKPPLADLGADPLTEKHMVIKEGRFGAYITDGETNVTVPRAEAIEQITAAR
ASQLLAEKRAKGPAPAKTTSRSRSSAKSGTAKSGTAKRSTTKGAATKSGEARKTTRKTAG
AGRSASK
NT seq 2904 nt   +upstreamnt  +downstreamnt
ttggcatccaaggccaccaagaacgccggtacgggcaagagcctgctgatcgtggagtca
ccgtccaaggtgaagacgatcgcggggtacctgggggacgcctatgaagtggagtcctcc
atgggccacatccgtgacctgccgcagccctccgagctgccgacggacatgaagaagggc
ccgtacggcaagttcgcggtggacgtggagcacgagttcgacccgtactacgtggtcaac
ccggacaagaagaagaaggtcacggagctcaagcgcaagctcaaggacgcggacgccctg
tacctggccacggatggtgatcgcgagggtgaggcgatcgcgtggcacctgttgcaggtg
ctcaagcccaaggtccccgtgtaccgcttgacgttcccggagatcacccgggaggccatc
gagcgcgggttcgcgcagttgcgggagatcgaccaggacctcgtggacgcccaggagacc
cgccgcatcctggaccggctctacggctacgagatctccccggtgctgtggcgcaaggtc
tcctcggggctctccgccgggcgcgtgcagtccgtggccacccgcctggtggtccagcgc
gaacgggagcggatcgcgttcgtgcccgccgactactgggacctcaccggcaccttctcc
cggcccgaggggcaggacaccgggagggccttcaccgcgcggttgagctccctgaacggc
cgccgcgtggccaccggcaaggacttcacggaccgcggcgagctcaaggcctccgggcag
aacgcccccgccgcgctggacgagaccgtggccacggcgctcgcggccggattgcaggac
gccgagttctcggtccgttcgctcgagaccaagccctacacgcgccgtcccgccgcaccg
ttcaccacctccacgctgcagcaggaggccgctcgcaagctgcgtttcacctcgcgcacc
accatgcgggtcgcgcagcggttgtacgagaacggctacatcacgtacatgcgtaccgac
tcggtcgcgctgtccgatcaggcggtcaacgccgcgcgctcgcaggccaaggagctctac
ggcgcggagttcgtccccgcctccaagcgcgtgtacgcgtccaaatccaagaacgcgcag
gaggcccacgaggccgtgcgccctgcgggggacaccttccgcaccccgtcgcaggtgcgc
tcgcagctgtccgtggacgagttcaagctctacgagctgatctggaagcgcaccgtggcc
tcccagatggaggacgccaagggcagcaccgcgaccgtccgcctgggcgccacggccacc
tccgccgccggtgagcattccggggccgacgccgagttctcggcttccgggaccgtcatc
accttccgggggttcctggccgcgtacgaggagggccgggacgtgaacccggatctcgcc
catgagaactcgaagcagtccgagaactccgaggacaagcggctgcccgtgatggccgag
ggtgacgccctggacgcctccgaggtcaccgcggacgggcacaccaccacgccccccgcc
cgctacaccgaggcctccctcgtgaagaccctggatgaactggggatcgggcggccctcc
acgtacgccgcgaccatctccacgatcatggaccgcggttacgtgcaggtgcgcggctcg
gcgttgatcccgtcctggctcgcgttctccgtggtgcggttgttggaggagcatttctcc
gactacgtggactacgacttcacggcggagcttgaggaggacctggaccggatcgcccgt
ggcgaggccgagcgggtcaagtggctcgaggggttctacttcggtgataccgcctccgaa
ccaggactcaagccgctcgtggacgacctcggggagatcgacgcccgcgccgtgaactcg
atccccgtcacggacgagatcacgttgcgcgtgggcaagttcggtccgtacctcgagacc
ggtggcacggtggacccggagacgggggaactgaccgacccggtgcgcgcgaacgtcccg
ctggacctcgccccggatgagctcacgcccgagaaggcgcgggaactcatggagatcggg
aaggcggacggccgtgagctgggcgtgaacccggacaccggtcggatgatcgtggccaag
gacggccgttacggtccctacgtcacggaggtgatcccggagcccacgcaggaggaactg
gacgcgatccccaccgagtactacaagaacggcaagcccaagcccaagaaggtcgagcgg
cccaagcccaacacggcatccctgttctcgtccatgaatctgcaggacatcaccctggac
gacgccctcaagctgctgtcccttccccgggtactgggtgaggacaccgacggtgaaacc
atcacggtgcagaacgggcgttacggcccgtacctgaagaagggctccgactcccggtcg
atcggttccgaggaccagatcttcacgatcaccctggacgaggccaagaccatttacgcg
cagcccaagcagcgcggtcgccaggccgccaagcccccgctcgcggatctgggtgcggat
cccctgaccgagaagcacatggtcattaaggaaggccgcttcggcgcgtacatcacggac
ggggagaccaacgtgacggtcccgcgtgccgaggcgatcgagcagatcaccgcggcccgc
gcgtcccagttgctcgccgagaagcgggcgaagggcccggcgcccgccaagacgacgtcg
cgctctcgcagctcggccaagagcggcacggccaagagcgggacggcgaaacgttccacg
accaagggtgcggctaccaagagtggcgaggccaggaagaccacgcgcaagaccgccggc
gcggggcgttccgcgagcaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system