KEGG   Kitasatospora sp. MMS16-BH015: CFP65_5070
Entry
CFP65_5070        CDS       T05366                                 
Name
(GenBank) NAD-dependent DNA ligase LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kit  Kitasatospora sp. MMS16-BH015
Pathway
kit03030  DNA replication
kit03410  Base excision repair
kit03420  Nucleotide excision repair
kit03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kit00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CFP65_5070
   03410 Base excision repair
    CFP65_5070
   03420 Nucleotide excision repair
    CFP65_5070
   03430 Mismatch repair
    CFP65_5070
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kit03032]
    CFP65_5070
   03400 DNA repair and recombination proteins [BR:kit03400]
    CFP65_5070
Enzymes [BR:kit01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     CFP65_5070
DNA replication proteins [BR:kit03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     CFP65_5070
DNA repair and recombination proteins [BR:kit03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     CFP65_5070
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CFP65_5070
   MMR (mismatch excision repair)
    DNA ligase
     CFP65_5070
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      CFP65_5070
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD HHH PTCB-BRCT RNA_lig_T4_1
Other DBs
NCBI-ProteinID: AUG79782
UniProt: A0A2H5B5W2
Position
5914615..5916927
AA seq 770 aa
MAAVEGWEDVPAEVRKRAAELAVELEEHRVRYYEQDAPTVSDAEFDALMRELEAIEAEHP
VLVTPDSPTQKVGGGATDAFAKVEHRERLLSLDNAMDDEELSAWAERVAKELDGLEYHYL
CELKVDGLAVNLTYERGQLVLAATRGTGRVGEDITTNVRTIKEIPHQLKGDHIPELVEIR
GEVFLPTEAFAELNASFAAENDRRRAENEERAKEGKRPHALVKLFANPRNAAAGSLRQKD
PLVTASRPLHMVVHGIGARVGFEIDNQSHAYQLLHDWGLPTAKHNRVVSSLEEVRAFIKQ
YGEQRHSVEHEIDGVVVKVDEIALQGRLGATSKSPRWAIAWKYPPEEVNGKLARIQVGIG
RTGRATPFAVLAEPVKVAGSMVQYATLHNQEIVKAKGVLLGDTVVLRKAGDVIPEILGPV
EDLRDGTETEFVMPTHCHECGTELRPMSEGDIDVRCPNAQHCPAQVRERLAYLGGRESLD
IEGLGYVAATALTQPLEPAEAPVANEGDIFALTLEQLLPIKVKVRDQKTGLPKLDDKSGK
EKVATFFANLKGEPKKTATLLLENLDKAKDRPLWRYVNGLSIRHVGPVAAQALAREFRDL
DRIFAATEEELAAAEGVGPTIARSIKEWYEEEWHREIIEKWRAAGVVFVEEAAEAEGDRP
LEGLTVVVTGTLAGHTRDGAKEALTSRGAKVTGSVSKKTDFVVAGDNPGSKYDKAVQLGL
AVLDDAGFTVLLEQGPVAARALLGIEEAAPEESPGAAAETPEAEAEPTNG
NT seq 2313 nt   +upstreamnt  +downstreamnt
gtggcggcggtcgagggctgggaagacgttccggctgaggtgcggaagcgggcggccgag
ctggcggtcgagctggaggagcaccgcgtccggtactacgagcaggacgcgccgacggtc
agcgacgccgagttcgacgccctgatgcgcgagctggaggcgatcgaggccgagcacccc
gtgctggtcacccccgactcgccgacccagaaggtcggcggcggggccaccgacgccttc
gccaaggtcgagcaccgcgagcgcctgctcagcctggacaacgcgatggacgacgaggag
ctgtcggcctgggccgagcgcgtcgccaaggagctggacgggctggagtaccactacctc
tgcgagctgaaggtggacggcctggccgtcaacctcacctacgagcgcggccagctggtg
ctcgccgccacccgcggcaccggccgggtcggcgaggacatcaccaccaacgtccgcacc
atcaaggagatcccgcaccagctcaagggcgaccacatccccgagctggtcgagatccgc
ggcgaggtcttcctccccaccgaggccttcgccgagctgaacgcctccttcgccgccgag
aacgaccgccgccgcgcggagaacgaggagcgggccaaggagggcaagcgcccgcacgcc
ctggtcaagctgttcgccaacccgcgcaacgccgcggccgggtcgctgcgccagaaggac
ccactggtcaccgcctcccgcccgctgcacatggtggtgcacggcatcggcgcccgggtc
ggcttcgagatcgacaaccagtcgcacgcctaccagctgctgcacgactggggcctgccc
accgccaagcacaaccgggtggtctcctccctcgaggaggtccgcgccttcatcaagcag
tacggcgagcagcgccactcggtggagcacgagatcgacggcgtggtcgtcaaggtggac
gagatcgccctgcagggccggctgggcgccacctccaagtcgccgcgctgggcgatcgcc
tggaagtacccgccggaggaggtcaacggcaagctggcccggatccaggtcggcatcggc
cgcaccggccgggccaccccgttcgccgtgctggcggagccggtcaaggtggccggctcg
atggtccagtacgcgacgctgcacaaccaggagatcgtcaaggccaagggcgtcctgctg
ggcgacaccgtggtgctccgcaaggcgggtgacgtcatccccgagatcctcggcccggtc
gaggacctgcgggacggcaccgagaccgagttcgtgatgcccacccactgtcacgagtgc
ggcaccgagctgcgcccgatgtccgagggcgacatcgacgtgcgctgccccaacgcccag
cactgcccggcccaggtgcgcgagcgcctggcgtacctgggcggccgggagtcgctggac
atcgagggcctggggtacgtcgcggccaccgcgctcacccagccgctggagccggccgag
gccccggtggccaacgagggggacatcttcgccctgacgctggagcagctgctcccgatc
aaggtcaaggtgcgggaccagaagaccggcctgcccaagctggacgacaagtccggcaag
gagaaggtggcgacgttcttcgccaatctcaagggcgagccgaagaagacggcgaccctc
ctgctggagaacctggacaaggccaaggaccgcccgctgtggcgttacgtcaacggcctc
tcgatccggcacgtcggcccggtggcggcccaggcgctggcccgcgagtttcgtgacctg
gaccgcatcttcgcggccaccgaggaggagctggcggcggccgagggggtcggcccgacc
atcgcccgctcgatcaaggagtggtacgaggaggagtggcaccgggagatcatcgagaag
tggcgcgcggccggtgtggtcttcgtcgaggaggctgccgaggccgagggtgaccgcccg
ctggaggggctgacggtggtggtgaccggcacgctggccggacacacccgggacggcgcc
aaggaggcgctgaccagccgtggagccaaggtgaccggctcggtttcgaagaagaccgat
ttcgtggtcgccggtgataatcccgggtccaagtacgacaaggctgtacaactcgggctg
gcggtgctcgacgacgcgggcttcaccgtcctgctggagcagggcccggtggccgcccgc
gcgctgctcggcatcgaggaggcggctcccgaggagtcacccggggcggccgccgagacc
cccgaggccgaagcggagcccacgaacggctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (29)   

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