KEGG   Kingella kingae: KKKWG1_1393
Entry
KKKWG1_1393       CDS       T04151                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
kki  Kingella kingae
Pathway
kki02024  Quorum sensing
kki03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kki00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KKKWG1_1393 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KKKWG1_1393 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kki03019]
    KKKWG1_1393 (hfq)
   03036 Chromosome and associated proteins [BR:kki03036]
    KKKWG1_1393 (hfq)
Messenger RNA biogenesis [BR:kki03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     KKKWG1_1393 (hfq)
Chromosome and associated proteins [BR:kki03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    KKKWG1_1393 (hfq)
SSDB
Motif
Pfam: Hfq LSM APMV_polyA_pol_cat_2nd
Other DBs
NCBI-ProteinID: CRZ20572
Position
I:complement(1340455..1340748)
AA seq 97 aa
MTTAKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGQVESFDQYVVLLRNTSVTQMVYKH
AISTIVPARAVSLQQDGKPVMTRTLQQVETIAPTEAE
NT seq 294 nt   +upstreamnt  +downstreamnt
atgacaaccgccaaaggacaattattgcaagaccctttcttgaacgctttacgcaaggaa
cacgtccctgtttctatctacttggtaaacggcattaaattgcaaggacaagtggaatcg
tttgaccaatacgttgtgttgctgcgtaatacatcggtaacgcaaatggtgtacaaacac
gcgatttctaccattgtgccagcacgagcggttagcctgcaacaagacggcaaacctgtt
atgacgcgcactttgcaacaagtggaaacgattgcaccaaccgaagcggaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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