KEGG   Klebsiella sp. LTGPAF-6F: BJF97_24565
Entry
BJF97_24565       CDS       T05751                                 
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kll  Klebsiella sp. LTGPAF-6F
Pathway
kll03410  Base excision repair
kll03430  Mismatch repair
kll03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kll00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BJF97_24565
   03430 Mismatch repair
    BJF97_24565
   03440 Homologous recombination
    BJF97_24565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kll03400]
    BJF97_24565
DNA repair and recombination proteins [BR:kll03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     BJF97_24565
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BJF97_24565
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      BJF97_24565
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB
Other DBs
NCBI-ProteinID: AOV14029
UniProt: A0A1D8JZC9
Position
complement(5257369..5259102)
AA seq 577 aa
MKQQIQLRRREAADGVDLPADLPPLLQRLYASRGVRSAQELERGVKGMLPWSQLTGVEKA
VEMLYGAFQQGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVERAHALGIPVLVTDHHLPGDSLPAAEAIINPNLR
DCEFPSKSLAGVGVAFYLMLALRTFLRDKGWFEERGIAPPNLADLLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNTGEARVLANELDALNQTRKEIEQGMQAEALTLCEKLERSGETLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAAAEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTS
LWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
NT seq 1734 nt   +upstreamnt  +downstreamnt
gtgaaacaacagatacaactacgccgccgcgaggcggctgacggcgtcgatttacctgcc
gatctcccaccgctgctgcagcggctgtacgccagccgcggcgtgcgtagcgcgcaggag
ctggaacgcggcgtgaaaggcatgctgccgtggtcgcagctgaccggcgtcgaaaaagcg
gtagagatgctctacggcgcatttcagcaggggctgcatattgtggtggtcggcgatttt
gacgccgacggcgccaccagcaccgcgctgagcgttctggccctgcgggcgctgggctac
ggcaacgtctcgtacctggtgccaaaccgttttgaagatggctacggcctgagcccggaa
gtggtcgatcaggctcacgcccgcggcgcgcagatgattatgaccgtggataacggtatt
tcttcgcacgctggcgtcgaacgcgcccatgcgctgggtattccggtgctggtgaccgat
caccacctgccgggggattcgctgcccgcggcggaagcgattattaacccgaacctgcgc
gactgtgagtttccgtcgaaatcgctggccggggtgggcgtggccttttatctgatgctg
gcgctgcgcacttttctgcgcgataaaggctggtttgaggagcgcggcattgcgccgccg
aatctggctgacctcctcgacctggtggcgctcggcaccgtggcggacgtcgtaccgctg
gatgccaacaaccgtattctgacctggcaggggctgagccgcatccgggcggggaaatgc
cgtccgggcattaaggctctgctggagatcgccaaccgcgacccgcaaaagctggcggca
agcgatctcggcttcgcgctcggtccgcggcttaacgcggctgggcggctggacgatatg
tccgtcggcgtggcgctgctgctgtgcgacaacaccggcgaagcgcgggtgctggccaat
gagctggacgcgttgaaccagacgcgcaaagagatagagcaggggatgcaggcggaagcc
ctgaccctgtgtgagaagctggagcgcagcggtgagacgctgcccggcggcctggcgatg
taccatccgcagtggcaccagggcgtcgttggcattctggcctcgcgtatcaaagagcgt
ttccatcgtccggttatcgcctttgcgcccaccggcgacggtacgctcaaaggctccggt
cggtcgattcaggggctgcatatgcgcgatgcgctggagcgtctggatacgctctatccc
gggctgattctgaagtttggcggccatgccatggcggcggggctatcgctggaagaggcg
cgctttgaagagttccagcagcgcttcggcgagctggtgaccgagtggctcgatcctgcg
ctgctgcagggggaagtggtctccgacggtccgctggcggcggcagaaatgagcatggag
gtcgcgcagatgctgcgcgacgccggaccgtgggggcagatgttcccggagccgctgttt
gacggccgtttccgtctgctacagcagcgcctggtcggcgagcgtcatctgaaggtgatg
gttgagccggtcggcggcggcccgctgctggacggtatcgcgttcaatgttgatacttcc
ctttggccggataacggcgttcgcgaagttcagcttgcctataagcttgatatcaatgag
ttccgcggcaaccgcagcctgcagctgatcattgaccacctctggccaaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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