KEGG   Pantoea rwandensis: LH22_06500
Entry
LH22_06500        CDS       T03331                                 
Name
(GenBank) ssDNA exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kln  Pantoea rwandensis
Pathway
kln03410  Base excision repair
kln03430  Mismatch repair
kln03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LH22_06500
   03430 Mismatch repair
    LH22_06500
   03440 Homologous recombination
    LH22_06500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kln03400]
    LH22_06500
DNA repair and recombination proteins [BR:kln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     LH22_06500
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     LH22_06500
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      LH22_06500
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Peripla_BP_6
Other DBs
NCBI-ProteinID: AIR85135
Position
1389396..1391120
AA seq 574 aa
MHSVELRRREIQADASLPDTLPPLLRRLYLQRGVKEAAELERGAKHLLPWQTLGGIDQAV
ALLRQMLETGRRIVVVGDFDADGATSTALTVLALRSMGGNVDYLVPNRFEDGYGLSPEVV
EQARARGAEMILTVDNGISSHAGVETAHQHGIPVLITDHHLPGETLPAAEAIVNPNLNDS
AFPSRSLAGVGVAFYLMLALRAHLRLQNWFSDGRNEPNLAEWLDLVALGTVADVVPLDAN
NRILVWQGLSRIRAGKCRAGIRALLEIANRDARQLAASDLGFAVGPRLNAAGRLDDMSVG
VALLLTEDIAQARMLANELDALNQTRKEIEQGMKSEALALCDELERQHTDLPLGLAFYHP
EWHQGVVGILASRLKERFHRPVIAFAPAGDGTLKGSGRSIAGLHLRDALERLDTLYPGMM
MKFGGHAMAAGLSLETEKYELFRERFAALIDEWLDGEALQGVIWSDGELHAQEFTLHTAE
MLREAGPWGQTFPEPVFDGQFKLLQQKLVGERHLKVMIEPLGGGPLLDGIAFNVDTTLWP
DTSVRQVKLAYKLDINEYRGNRSVQLIIDHIWPV
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgcattctgtcgaactgcgtcggcgtgaaattcaggctgacgccagcttacctgatacc
ttacccccgttactgcgccgtttatacctgcaacgcggtgtcaaagaggctgctgagcta
gagcgtggtgcaaaacatctgctgccgtggcaaaccctgggtggcatcgatcaagcggta
gccttactgcgtcagatgctggaaacaggccgccgtattgtggtggtcggtgattttgat
gccgatggcgcaaccagcaccgcattaaccgtcttagcgctgcgcagcatgggcggaaac
gtcgattatctggtgccaaaccgctttgaggatggctacggcctgagtcctgaagtggtc
gaacaggcacgtgcgcgtggtgcggagatgattctcaccgtggataacggcatctcttcc
catgcaggcgtagaaaccgcccatcagcacggtattcccgtgctgatcaccgatcaccac
ttgccaggcgaaacgttgccagcagcggaagcgatcgttaacccgaatctcaatgacagc
gcattcccttcgcgttcgttagcgggtgtgggcgtggcgttttatctgatgctggcgctg
cgtgcgcacctgcgtttgcagaactggtttagtgatggccgaaacgaacctaatctggcg
gagtggctggatctggtcgcgctaggtacggtggctgacgtggtgccgctggatgccaat
aaccgcattttggtgtggcagggcttgagccgcatccgcgccggaaaatgccgggcgggt
atccgcgcgctgctggagatcgccaaccgcgatgcgcgtcaactggcggccagcgacctc
ggttttgccgtcgggcctcgcctcaatgcagccggtcgactggatgatatgtcggtcggc
gtggcactgctgctcaccgaagacattgcgcaggcgcgcatgcttgccaacgagcttgat
gcgctgaaccagacgcgcaaagagattgagcagggcatgaagagcgaagcgctggcgctg
tgcgatgagctggaacgccagcacaccgatctgccgctggggctggccttctatcatccc
gaatggcatcagggcgtggtcggcattctggcatcacggttgaaagagcgtttccatcgt
ccggtcatcgccttcgccccagccggcgatggcacgctaaaaggctcgggtcgttcgatt
gccggcttgcatttacgtgatgcgctggagcgtctcgatacgctctatcccggcatgatg
atgaagtttgggggccacgcgatggcggcgggcctgtcgctggaaaccgaaaaatacgaa
ctgttccgcgagcgctttgctgcgctgatcgacgaatggctggatggcgaagcgctgcag
ggcgtgatctggtctgatggcgaactgcacgcacaggagttcacgctgcataccgccgaa
atgctgcgtgaagccggcccgtggggccagacgttcccggaaccggtgtttgatggccag
ttcaaactgctgcaacaaaagctggtgggcgagcgtcacctgaaggtcatgattgagcca
ctgggcggcggaccgctactggatggtatcgcgtttaacgttgatactaccttgtggccg
gataccagcgtgcgccaggtgaagctggcctacaaactcgatatcaacgaataccgtggc
aaccgctcggttcaactgattatcgaccatatctggccggtataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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