KEGG   Pantoea rwandensis: LH22_07040
Entry
LH22_07040        CDS       T03331                                 
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
kln  Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:kln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kln03021]
    LH22_07040
Transcription machinery [BR:kln03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LH22_07040
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2
Other DBs
NCBI-ProteinID: AIR85235
Position
1515094..1516086
AA seq 330 aa
MNQNTLKVNELHEDAEFEENGAEVFDEKALVENEPGDNEVAEEELLSQGATQRVLDATQL
YLGEIGYSPLLTAEEEVFFARRALRGDIPSRRRMIESNLRLVVKIARRYSNRGLALLDLI
EEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHIVKELNVYLR
TARELSHKLDHEPSAEEIAEQLDKPVDDVSRMLRLNERITSVDTPLGGDSEKALLDILAD
EKDNGPEDTTQDDDMKQSIVKWLFELNAKQREVLARRFGLLGYEAATLEDVGREIGLTRE
RVRQIQVEGLRRLREILQTQGLNIEALFRE
NT seq 993 nt   +upstreamnt  +downstreamnt
atgaaccagaatacgctgaaagttaacgagttacatgaagatgcggaattcgaggagaac
ggagctgaggtttttgatgagaaggctctcgttgagaacgaacctggtgataacgaagta
gctgaagaagagctgttgtcacagggtgcgacgcaacgcgttttggatgcgacgcagctt
taccttggtgagatcggttactctccactactgacggcggaagaagaagtgttcttcgct
cgtcgtgcactacgtggtgacattccttctcgccgccgcatgattgaaagtaatttacgc
ctggtggtgaaaattgcccgtcgttatagcaatcgtggtctcgcactgctggatctgatt
gaagagggtaatctcggcctgattcgtgccgtggagaagtttgacccagaacgtgggttc
cgtttctcaacatacgccacctggtggatacgtcagactattgaacgggcgatcatgaat
caaacccgtactattcgtctgccgatccacatcgttaaagagttgaatgtttatctgcgt
accgcgcgagaactttcgcacaagcttgaccatgagccgagtgctgaagagattgccgag
cagttagacaagccggttgatgatgtaagccgtatgctgcgtctcaacgagcgtattacc
tcggttgacacaccgctgggtggagattccgaaaaagcgctgctggatatcctggccgat
gaaaaagacaacggcccggaagacaccacgcaggacgatgatatgaaacaaagcatcgtt
aagtggttgtttgaattgaatgccaagcagcgtgaagtgctagcgcgtcgtttcggcctg
ttaggctatgaagcggcaacgttggaagatgtgggccgtgagatcgggttgacccgtgag
cgcgtccgtcagattcaggttgaaggtctgcgtcgtctgcgtgaaatcctgcagactcag
ggcctcaacattgaagcactgtttcgcgaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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