KEGG T03331: LH22

Pantoea rwandensis: LH22_16675

Entry

LH22_16675        CDS       T03331

Name

(GenBank) deoxyribodipyrimidine photolyase

K01669

deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]

Organism

kln Pantoea rwandensis

Brite

KEGG Orthology (KO) [BR:kln00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kln03400]
    LH22_16675
Enzymes [BR:kln01000]
4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     LH22_16675
DNA repair and recombination proteins [BR:kln03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    LH22_16675
Prokaryotic type
    LH22_16675

SSDB

Motif

Pfam:

FAD_binding_7 DNA_photolyase

Other DBs

NCBI-ProteinID:

AIR87022

Position

complement(3546093..3547520)

AA seq 475 aa
MTTHLVWLRNDLRINDNTALAAACRDSHARVLALFIATPKQWQQHHMAPRQAAFIHQNLC
SLQDSLAERGIPLHYHQCDDFAASVDYLSAFCDQHQVDELYYNYQYEINERERDAAAEKR
LDGQGVICQGFDDSLLLPPGSVQTGNHTMFKVFTPFSRAFVRRLHQGLPECHHAPKARQD
APVSAGQKIPAFDYPLEAFDTSLFPAGEEAALKQLRHFGKQSVQHYPDVRDLPALDGTSR
LSPYLAIGVLSPRQCLHRILKEHPDALNEGKAFTWLNELIWREFYRHLMVAFPALCKHQP
FVEWTHNVQWQKNDAHLTAWQQGKTGYPIVDAAMRQLNTLGWMHNRLRMIVASFLVKDLL
IDWHEGERYFMQQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDEKGEFIR
QWVPELKDVPESDIHQPQVWAKKNNKKLDYPAPIVEHKDARKKTLDAFERARSAA

NT seq 1428 nt +upstreamnt +downstreamnt
atgaccacccacttagtctggttgcgtaacgatctgcgcatcaatgacaacactgcgctg
gctgctgcctgccgcgacagccatgcgagggtgctggcgctatttattgccacgcccaaa
cagtggcagcaacaccatatggcaccgaggcaggcggctttcattcatcagaatctgtgt
tcgttgcaagattcactggccgagcgcggtattccgttgcattaccatcagtgcgatgac
tttgctgcttcagtggattacctgagtgcgttttgcgaccagcatcaggtggatgagttg
tattacaactatcagtatgaaattaacgagcgcgaacgtgatgcggccgccgaaaagcgt
ctcgatggccagggcgtaatttgtcagggctttgatgacagcctgttattgcctcccggc
agcgtgcagaccggcaatcacaccatgtttaaagtcttcacaccgttcagccgcgccttt
gtccgtcgactgcatcagggattaccggagtgccatcatgcaccgaaagcgcgccaggat
gcgccggtcagtgcgggtcagaaaatcccagcatttgattatccactggaagcgttcgat
acatcgctgtttccggctggggaagaggccgcgttaaagcagttgcgccatttcggcaaa
caatccgtgcagcactatcccgacgtgcgtgatttaccggcattagatggcaccagccgc
ctctcgccctacttggccataggagtactgtctccgcgccagtgcttacatcgtatattg
aaagaacatcctgatgcgttgaacgaaggcaaagcctttacctggctcaatgaactcatc
tggcgcgagttttatcgccatctgatggtggcatttccggcgttgtgtaagcaccagccg
tttgtggagtggacgcataacgtacagtggcaaaaaaacgatgcacatctcacggcctgg
cagcagggcaaaacgggatatcccattgtcgatgcggcaatgcgtcaactcaacacgctg
ggctggatgcacaatcgcctgcgcatgattgttgccagctttttggtaaaagacctgctg
atcgactggcatgagggggaacgctacttcatgcaacaactgattgatggcgatctggcg
gccaacaacggtggctggcagtgggcggcctcaacgggcaccgacgcggcaccgtacttt
cgcatattcaatccaacgactcagggggaacgctttgacgaaaaaggcgaatttatccgc
cagtgggtaccagagttgaaagatgtgccggagagtgacattcaccagccgcaggtgtgg
gcgaagaaaaacaacaagaaactcgattatcccgcgccaatcgtggaacataaggacgca
cgtaaaaagacattagacgcctttgagcgcgcgcgcagcgcggcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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