KEGG   Pantoea rwandensis: LH22_19010
Entry
LH22_19010        CDS       T03331                                 
Name
(GenBank) ATP-dependent helicase
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
kln  Pantoea rwandensis
Brite
KEGG Orthology (KO) [BR:kln00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kln03021]
    LH22_19010
Transcription machinery [BR:kln03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     LH22_19010
SSDB
Motif
Pfam: RapA_C Tudor_1_RapA Tudor_RapA SNF2-rel_dom Helicase_C ResIII DEAD AAA_34 Helicase_RecD Stereocilin Flavi_DEAD
Other DBs
NCBI-ProteinID: AIR87447
Position
4023218..4026124
AA seq 968 aa
MVFTLGQRWISDTESELGLGTVVAIDTRMITMMFPATGENRLYARNDAPVTRVIFNPGDT
ITNHEGWQMSVDEVRNDNELMTYIGTRLDTEESGVVMREVMLDSKLVFSKPQDRLFAGQL
DRMDRFSLRFRARKYQSEQYRLPISGLRGMRTNLIPHQLHIAHDVGRRHAPRVLLADEVG
LGKTIEAGMIIQQQLLAGRADRVLIVVPETLQHQWLVEMLRRFNLRFALFDDDRYTEAQH
DSDNAFETEQLIICSLDFVRRNKQRLELLADADWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEKTPGVLLLTATPEQLGLESHFARLRLLDPNRFHDFSQFVAEQQNYRPVADAVSSLL
ADQAITKEEMNLINDLIGEQDIEPLLQVANSDRDGKEDARKELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHQIRLPLPAQYQTAIKVSGIMGTRKSAEERARDMLYPEKIYQEFEGD
SGTWWNFDPRVEWLMGYLTSNRKEKVLVICAQAATALQLEQVLREREGIRAAVFHEGLSI
LERDRAAAFFASEEEGAQVLLCSEIGSEGRNFQFASRLVMFDLPFNPDLLEQRIGRLDRI
GQMHDIQILVPWLEKTAQAVLLRWYHEGLDAFEHTCPTGRTIYDSEYSKLIEYLAAPENP
QGLDEFIAESRKQHDTLKSQLEQGRDRLLELNSNGGEAAQALANAIGEQDNDTDLVNFAL
NLFDIVGINQEDRSDSLIVLTPSDHMLVPDFPGLPEDGCTVTFNRNQALSREDTQFITWE
HPLIRNGLDLILSGDTGSCALSLLKNKALPVGTLLVEMVYVVEAQAPKSLQLTRFLPPTP
VRLLMDRAGNNLAGKVEFESFNRQLNAVNRHTGSKLVNAVQQEVHEILTQAEKVVIPEAQ
AIIAAAKVEADEKLSAELSRLEALRAVNPNIRDDEVEALESNREQVLASLGDAGWRLDAL
RLIVVTHQ
NT seq 2907 nt   +upstreamnt  +downstreamnt
atggtttttacactgggtcagcgctggattagtgatacggaaagtgaactgggattagga
acggtggtggcgattgatacccgcatgatcaccatgatgttcccggcaaccggcgaaaac
cgcctgtatgcccgtaatgatgctcccgtcacccgtgtgattttcaatccgggcgacacc
atcaccaaccacgaaggttggcagatgagcgtcgatgaagtccgcaacgataacgaatta
atgacttacatcggcacgcgtctcgacaccgaagaaagcggcgtggtgatgcgcgaagtg
atgctggacagcaaactggtattcagtaagcctcaggatcgcctgttcgccggtcagctc
gaccgtatggaccgtttctccctgcgcttccgtgcgcgtaaataccagagcgagcagtat
cgcctgccgatcagcggtctgcgtggcatgcgcaccaacctgattccgcatcagctgcat
atcgcccatgatgtcggccgccgtcatgcgccacgcgtgttgctggcggatgaagtgggc
ctgggcaaaaccattgaagccgggatgatcattcagcaacagctgctggctggtcgtgcc
gatcgcgtactgatcgtggtgccggaaacgctccagcaccagtggctggtagagatgttg
cgccgcttcaacctgcgctttgccctgtttgatgacgaccgctacaccgaagcccagcat
gacagtgataacgccttcgaaaccgagcagttaattatctgctcgctagacttcgtgcgt
cgcaataagcagcgtttggaattactcgctgatgccgactgggatttactggtggtcgat
gaagctcaccatctggcctggagcgaagaggcacccagccgtgaatatcaggtaattgaa
cagctggcggaaaaaacgcctggcgtattgctgctgacggcaacgccggaacagctgggc
ctggaaagtcactttgcccgtttacgtctgctcgatccaaaccgcttccacgacttcagc
cagtttgtggctgagcagcagaattatcgcccggtggctgatgccgtcagctcattgctg
gccgatcaggcgatcaccaaagaagagatgaacctgatcaatgacctgatcggcgagcag
gacatcgagccgctgctgcaggtggcgaacagcgatcgtgatggcaaagaagatgcgcgc
aaagagctggtctcgatgttgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggcgtgaagggcttcccgaaacgcgaactgcaccagattcgtttgccgctg
cccgcgcagtatcaaaccgcgattaaagtttccggcattatgggcacgcgtaagagcgca
gaagaacgcgcacgtgacatgctgtatccggaaaagatttatcaggaatttgaaggcgat
agcggtacctggtggaacttcgacccacgcgtagaatggctgatgggctacctgaccagc
aaccgtaaagagaaagtgctggtgatttgcgctcaggccgccactgcgctgcaactggaa
caggtgctgcgtgagcgtgaaggtattcgtgccgcggtgttccatgaaggattatccatt
ctggagcgtgaccgtgctgcggcatttttcgcttcagaagaagaaggtgcgcaggtgctg
ctgtgctcggagatcggttctgaaggccgcaacttccagttcgccagccgcctggtgatg
ttcgacctgccgtttaacccggacctgctggaacagcgtattggtcgtcttgaccgtatt
ggccagatgcacgacatccagattctggtgccgtggctggaaaaaaccgcccaggcggtg
ctgctgcgctggtatcacgaaggcctggatgcgtttgaacatacctgcccgactggccgc
accatctatgacagcgaatacagcaagctgattgaatacctcgccgcgccagagaatccg
caagggctcgacgagttcattgcagagagtcgcaaacagcacgacacgctgaaatcgcag
ttggaacagggtcgtgaccgtttgcttgagctgaactccaacggcggcgaagcggcgcaa
gcgctggcgaacgctatcggtgaacaggataacgacactgatctggtcaacttcgcactg
aatctgttcgatatcgtcggtatcaatcaggaagatcgcagtgacagcctgatcgtgcta
acgccatccgatcatatgctggtgccggatttcccaggtttgccggaagacggctgcacc
gtgactttcaaccgcaaccaggcgctatcgcgcgaagacacccaattcatcacctgggaa
catccgctgatccgtaatggtctcgatttgatcctgtccggtgataccggcagctgtgca
ttatcactgttgaaaaacaaagcgctgccggtgggtacgctgctggttgagatggtctat
gtggttgaagcgcaggcaccgaaaagcctgcaactcacccgcttcctgccgccaacgccg
gtgcgtttgctgatggatcgtgctggcaacaacctggcaggcaaagtggagtttgaaagc
tttaaccgccagttaaatgccgtgaatcgccataccggtagcaaactggttaacgcagtg
cagcaggaagtgcacgagattctgacgcaggccgaaaaagtggtgattccggaagcacag
gcgatcatcgcagcggcgaaagtcgaggcggatgagaagctgagtgccgagttgtcacgt
cttgaagcgctgcgagcggtcaaccccaacatccgcgatgatgaagttgaagcgctggaa
agcaatcgcgaacaggtgctggcaagcctcggtgatgcgggctggcgtctggacgcgctg
cgtctgattgttgtcacgcaccaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (11)   
   Pfam (11)   
All databases (17)   

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