KEGG T05608: 108228797

Kryptolebias marmoratus (mangrove rivulus): 108228797

Entry

108228797         CDS       T05608

Symbol

trmt13

Name

(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog

K15446

tRNA:m4X modification enzyme [EC:2.1.1.225]

Organism

kmr Kryptolebias marmoratus (mangrove rivulus)

Brite

KEGG Orthology (KO) [BR:kmr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:kmr03016]
    108228797 (trmt13)
Enzymes [BR:kmr01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.225  tRNA:m4X modification enzyme
     108228797 (trmt13)
Transfer RNA biogenesis [BR:kmr03016]
Eukaryotic type
  tRNA modification factors
   Methyltransferases
    108228797 (trmt13)

SSDB

Motif

Pfam:

TRM13 zf-TRM13_CCCH zf-U11-48K Methyltransf_32

Other DBs

NCBI-GeneID:

108228797

NCBI-ProteinID:

XP_037834451

Position

LG1:complement(35879409..35887258)

AA seq 458 aa
MAAPGRCGFFVQKKNRFCKMIVGKGKRFCGEHATMEEVGGSKRIPCPLDPKHTVTEDKLE
KHLKKCNSRDRPRAVYFVENINAGPADGDEKLPQVGLSERSGAELESLVDKLKTAVEGLQ
WDMEDKILSHFVLNDELTNPKNGDSAHKHLKQQASILGHLEDLGLLQRGRCFVEFGAGRG
KLSHWIHEALKTREDLKTHEDLKTHEDLQLLLVERSSTRFKVDGKHQDTGAEFERLQVDI
QHLDLRKVPLLQQKKLPLVGVGKHLCGAATDLALRCLLETSKVREETEPAPKRLRSSEPR
PGEDPETSEPGPGTGPVLGMALALCCHHRCEWRHYVGQQFFLQRGLGPAEFSAFCRMSSW
ATCGFRLSNQDCPSQDPTNQRVEHEGHKPAAETDAVTGLLSAAERQHVGRLCKLMIDGGR
HHFLKTKGFSSKLIRYVEPQVTLENILLTAVPSCPALS

NT seq 1377 nt +upstreamnt +downstreamnt
atggcggcccccggcagatgcggcttcttcgtgcagaaaaagaaccggttctgtaaaatg
atcgttgggaaaggaaaacggttctgcggagagcacgcgaccatggaggaagtgggaggc
agcaagaggatcccctgtcctctggaccccaaacacacagtaactgaagacaaattggag
aaacatctgaagaaatgtaactccagagaccgccccagagctgtgtattttgttgagaac
atcaatgcaggaccagctgatggagatgagaagcttccacaggtgggtctgtctgagcgc
agtggagcagagctggagtctttggtggacaaactgaagacagctgttgaaggactgcag
tgggacatggaggacaagattttgtcccattttgtcctaaatgatgaactgaccaaccca
aagaatggagactccgcccacaaacatctgaagcagcaggcctccatcttaggtcacctg
gaggacctgggactgctccagcgggggcgctgctttgtggagtttggagcaggtcgaggg
aaactgtctcactggatccatgaggccctgaagacccgagaggacctgaagacccatgag
gacctgaagactcatgaggaccttcagctgctgctggtggagcgctccagcacccgcttc
aaggtggacgggaaacatcaggacaccggcgctgagtttgagaggttgcaggttgacatt
cagcacctggacctgaggaaagtcccgctgctgcaacagaagaagcttcctttggtcgga
gttgggaaacatttgtgtggagcagcaacagatttggcattgcgctgcttactggaaaca
tccaaagtcagagaggagacagaaccagctccaaaacgcctcagatcatcagagccaagg
ccaggggaggatccagagacatcagaaccgggtcctggtactggtccggtgctaggaatg
gcgttggcgctgtgctgccaccatcgctgtgagtggcgtcactacgtgggccagcagttc
ttcctgcagagaggactcggacctgcagagttctctgccttctgtcgcatgtccagctgg
gccacgtgtgggttcagactgtccaatcaggactgtccatctcaggatccgaccaatcaa
agagtagagcatgaaggacataaaccagcagctgagacagatgctgtcaccgggttgctc
tcagcagctgagcggcagcacgtcgggcgtctctgtaagttgatgattgacggcggcaga
catcacttcctgaagactaaaggcttcagcagcaaattgatccgttacgtggaaccgcag
gtgactctggagaacattttactgacagctgtcccctcctgtcctgctctgtcctga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (4)   
   Pfam (4)   
All databases (17)   

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