KEGG T05608: 108232347

Kryptolebias marmoratus (mangrove rivulus): 108232347

Entry

108232347         CDS       T05608

Symbol

shox

Name

(RefSeq) LOW QUALITY PROTEIN: short stature homeobox protein

K09331

short stature homeobox protein

Organism

kmr Kryptolebias marmoratus (mangrove rivulus)

Brite

KEGG Orthology (KO) [BR:kmr00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:kmr03000]
    108232347 (shox)
Transcription factors [BR:kmr03000]
Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    108232347 (shox)

SSDB

Motif

Pfam:

Homeodomain Homeobox_KN MRP-L20

Other DBs

NCBI-GeneID:

108232347

NCBI-ProteinID:

XP_017265574

UniProt:

A0A3Q2ZQD4

Position

LG6:complement(17985390..17995398)

AA seq 336 aa
MEELTAFVSKSFDQKSKESTKESITYREVLESGLTRARELGSPESNLQDITDTNHCPVHL
YKEHVELEKDKLKDFNVSRATEGIYECKEKKEDVKSEDEDAQGKLKQRRSRTNFTLEQLN
ELERLFDETHYPDAFMREELSQRLGLSEARVQVWFQNRRAKCRKQENQMHKGVILGSGSH
LDACRVAPYVNMGALRMPFQQVQAQLQLDGVTHSHPHLHPHLAAHSLPDVPAPSLRTTNC
VSRRLSLGGGGGGGGSQKQQQELEHRRPATQGRTSAGPVAQSTPGTDHIPRTVQTHMDVS
LRAPRARSPSGQRTLEQSKLAGSSRAESRVSLTLVC

NT seq 1011 nt +upstreamnt +downstreamnt
atggaagaacttacggcattcgtgtcgaagtccttcgatcagaagagcaaggagagcacc
aaggagagcatcacgtacagggaagttttggagagcggcttgacgcgggcgcgggagctg
ggcagcccggagagcaacctgcaggacataacggacaccaaccactgccccgtgcacctc
tacaaggagcacgtggagctggagaaggacaaactcaaggactttaatgtttccagggcg
acggagggcatctatgagtgcaaggagaaaaaagaggacgttaagtcggaggacgaggac
gcgcagggcaaactgaagcagcggcggagtcgcaccaacttcaccctggagcagctcaac
gagctggagcggctcttcgacgagacgcactacccggacgcgttcatgagggaggagctg
agccagagactgggactgtccgaggccagggtgcaggtttggtttcagaacagaagagca
aaatgtcgaaagcaagaaaaccaaatgcacaaaggtgtcatcctgggcagcggcagtcac
ctggacgcgtgcagagtagctccgtatgtcaacatgggcgccctccgaatgcccttccaa
caggttcaagcacagctccagttggacggcgtcacacactcccaccctcacctgcaccct
cacctggcagctcattccctacctgatgttcccgccccctcccttcggactaccaattgc
gtctctcgccgactcagcctcggcggcggcggcggtggcggcggcagccaaaagcaacag
caagaactcgagcatcgccgacctgcgactcaaggcaggacttctgcggggccagtggct
cagtccactccaggcacagatcacatcccaaggaccgtacaaacacatatggatgtcagt
ctgagggccccgagggccaggagcccgtcaggccagaggacgttagaacaaagcaaactg
gcaggcagcagcagggctgaaagcagagtctcgctgacgctggtctgttga

All links

Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

Download RDF

DBGET integrated database retrieval system