KEGG   Kryptolebias marmoratus (mangrove rivulus): 108235391
Entry
108235391         CDS       T05608                                 
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:kmr01002]
    108235391 (usp5)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kmr04121]
    108235391 (usp5)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:kmr04147]
    108235391 (usp5)
Enzymes [BR:kmr01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     108235391 (usp5)
Peptidases and inhibitors [BR:kmr01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   108235391 (usp5)
Ubiquitin system [BR:kmr04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    108235391 (usp5)
Exosome [BR:kmr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108235391 (usp5)
SSDB
Motif
Pfam: UCH zf-UBP_var UBA zf-UBP UCH_1 Pox_RNA_pol
Other DBs
NCBI-GeneID: 108235391
NCBI-ProteinID: XP_017270851
Position
LG16:complement(9549458..9559867)
AA seq 848 aa
MADVGEVLMSVLSTIRVPKPGDRVHKDECALSFASPESEGGLYVCMNSFLGFGSQYVDRH
HARTGQRAYLHITRTRKAKKEDDTNSGSGHPPKKKPTRLAIGIEGGFDVEQEQYEEDVKV
VILPDRQEVNSEDLATMPDVVRERVSLSMAGIMAADSVSHTLQVQQWDGEVRQESKHAAD
LKQLDNGVKIPPSGWRCEVCDLQENIWMNLTDGKVLCGRRYFDGSGGNNHALLHYQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLKPLFGPGLTGMRNLGNSCYLNSVMQVLFTVPDFQSKYVSNFDKIV
DEAPSDPTQDFKTQVAKLGYGLVSGEYSKPAPDPGDENGASEPRGDQIGIAPQMFKALVG
RGHPEFSTNRQQDAQEFLLHFINMVERNCRSGPNPSEAFRFLVEEKIVCQQSQKAKYTQR
VDYIVQLPVPMDQATNTEELQEAERRREEGDSSAPTVRAQIPFSACMAALSEPEVLTDFW
SSAVQAKTTATKTTRFASFPDHLVIQIKKFTFGLDWVPKKLDVSIDVPDTLDLSALRATG
QQPGEELLPEVAPPPLMTPDVEVKGILGSHGNDEDDSLYSPLLSPVLDDSTVSQLCEMGF
PLEACRKAVYYTGNTGIDAAMNWIMSHMDDPDFSAPLVLPGSSSGPGTTPTESLSEEHLA
TIVSMGFSRDQATRALRATSNVLDRAVDWIFSHLDDFDSMEVSESGRSAAESEGGRDPPP
GPRVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPPKDLGYL
YFYRRVAE
NT seq 2547 nt   +upstreamnt  +downstreamnt
atggcggatgttggtgaggttctgatgtcggttttgtccacaattcgcgttccaaagccg
ggagaccgtgtccacaaagatgaatgcgccctgtcatttgcctcgccggagagtgaagga
ggcctgtatgtgtgcatgaacagtttcctgggttttggcagccagtacgtggacaggcac
catgctcggaccggtcagagagcttacttgcacatcacccggactcgtaaggccaagaag
gaagatgacactaactctggctctggacacccacccaagaaaaagcccactagactggcc
atagggattgaaggagggttcgatgttgaacaggagcaatatgaggaggatgtaaaagtg
gtaattttacctgacagacaggaagtcaattcagaggaccttgccacaatgcctgatgtc
gtaagagagcgggtgtctctgtcaatggcgggtatcatggcagccgactcagtgtctcat
accttacaagttcagcagtgggatggagaggtgaggcaggagtcgaagcatgcagctgac
ctgaaacagcttgacaatggagtcaagatccctcccagtggctggcggtgtgaagtgtgt
gaccttcaggaaaatatttggatgaacctgacagacggcaaagttctttgtggtcgtcgg
tattttgatggctcggggggcaacaaccacgctcttctccactaccaggagacgggatac
ccgctcgctgtcaaactcggtaccatcactcctgatggcgccgatgtgtattcttacgat
gaggatgacatggtgctggactccaagctaccggagcacttgtctcactttggcattgac
atgatgaccatggagaagactgagcggacaatgacagagttagagatcgctgtgaaccag
cgtgtaggggaatgggaggtaatccaggagtctggtaccaccctgaagcccttgtttggc
cccggcctgactggcatgaggaacctgggaaacagctgctacctcaattctgtcatgcaa
gtgctcttcaccgttccagacttccagagcaaatacgtgtcaaactttgacaagatcgtt
gatgaagcgccaagtgacccaacccaggacttcaaaactcaagtagctaaactgggttat
gggctggtgtcaggagagtattccaaaccagcaccggaccctggagatgaaaatggtgca
tctgaacccaggggtgaccaaatcggaatagcgccacaaatgtttaaagcacttgttgga
cggggtcacccagagttttctaccaatcgacagcaggatgcccaggagtttttattgcac
ttcataaacatggtggagagaaactgtcgctctgggcccaatccatcagaagctttcagg
tttctagtggaggagaagattgtttgccagcagtcacaaaaagccaagtacacacagcgg
gtggattacattgtacagctccccgtgcccatggaccaggctacgaacacagaagagctt
caggaggcagagcgccgccgtgaagagggggactcatcagcaccaacagtgcgtgcacaa
atccccttctcagcctgtatggcagctctcagtgaaccggaggtcctcacagacttctgg
agttcggccgtgcaagcaaagactactgctaccaaaacaacccgctttgcctctttcccc
gaccacctggttatccagattaaaaagttcacttttggccttgactgggtgcctaagaag
ctggatgtgagcatcgacgttcctgatactctggatctgagcgcgctgcgtgccaccggt
cagcagccaggggaggagcttctaccagaggtggccccgcccccactcatgaccccagat
gtggaggttaaaggtatcctgggttcccatggcaacgacgaggacgactcgctctactcc
ccactgctgtctccagtcctcgatgactctactgtttcccagctgtgtgaaatgggattc
cccctggaggcctgcaggaaagcggtatattacaccggaaacactggaattgatgctgcc
atgaactggatcatgagccacatggatgatccagacttttcggctcccttggtgttgccg
ggaagcagctctggaccgggaaccactcccacagagagcctgtccgaggaacacctggca
acaatcgtgtccatgggcttcagtcgagatcaggcaaccagagcactccgagcaacaagt
aacgttctggaccgcgcagtggactggatcttctcccacctggacgacttcgactccatg
gaggtgtctgaaagcggccgctcggctgcagagagcgagggcggcagggatcctccgcct
gggcctcgagtcagagacggaccaggcaagtacgagttatttgcgttcatcagccacatg
ggaacgagcaccatgtgtggccactacgtctgtcacatcaagaaggaccagcagtgggtc
atctttaacgatcagaaggtctgcgcctcagagaaacctcccaaagacctgggctatctt
tacttctatcgcagagtggctgaatga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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