KEGG   Kryptolebias marmoratus (mangrove rivulus): 108237047
Entry
108237047         CDS       T05608                                 
Symbol
ltn1
Name
(RefSeq) E3 ubiquitin-protein ligase listerin
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:kmr03009]
    108237047 (ltn1)
   04121 Ubiquitin system [BR:kmr04121]
    108237047 (ltn1)
Enzymes [BR:kmr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108237047 (ltn1)
Ribosome biogenesis [BR:kmr03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    108237047 (ltn1)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    108237047 (ltn1)
SSDB
Motif
Pfam: zf-RING_2 zf-ANAPC11 FANCL_C zf-rbx1 RINGv zf-RING-like zf-RING_16 zf-C3HC4_2 zf-C3HC4 C1_1
Other DBs
NCBI-GeneID: 108237047
NCBI-ProteinID: XP_017273716
UniProt: A0A3Q2ZSE2
Position
LG13:complement(12209005..12222025)
AA seq 1763 aa
MGGKNKQRTKGNVRPSSSGRAAEVLTREGGVIPGFVGFDTTVTSELSYVPAVHGAEEIDN
LVDADFRLVLRKLSKRDVVTRLKAVQDFGSMCQERDAEEVKGVLPYWPRIYCKISVDHDR
RIREATQLAFEQLVLKVRRSLAPFLKSLMGHWILSQCDTYTPAASAACKAFQAAFSPTKQ
PEALSFCKDEILNVLQDILLKETANTLSDPQSVTEEERESKYVRMLTSSLLGVKRLLSLL
LQTDRGALEPGLAQLVNSGKFWKYSKHKTPQVRGAFFEMVCALCEFTPALVQAEATRLCP
AVLLSIDDTDPVVLPPVWEAVLHVVSTIPDCWTHVNAKKGFLPKLWALLKEGGKGMAKAL
HPNLMPLLSKLPQQVTDPSLDFYTTFFTAFMQGLSSERAVTSPSESAIIVTSFVECLRYC
ILQNAEEEHSQEKIRTTLVSQQLLPLLEKAIRNPSLQNGPLFLLVTEMLVSWERRAGLHS
EDEEDSKKEVFERLLADFWEDICHLCVGFVDNEEADPQALEGVAILLQVMRYPERVSKKH
LQKKKSVRVCLSKPEEDEKTGVQGDGAEKLVQTASELVNEKAFGSLQTQHFEDAVCQLAQ
LCLVHVNEKNSEKHLIFLSLLLQSFHTSRVFGALVEFDEKIPEAGQWRDEKNPAVQFLLK
GAVVWLAEVGRSNTEHLVEMVFSSLCCCNQEETTRILNHITTMGLQWGIILQIIQRACKD
AETRASCADWLKGSILGEQLLGLTEELCKVGSSSRASTSSTSCHSWALISLVLSQNHNNE
SLIGEVYMEMILEKLHTTLTETKSLSDAGNMEPLISFICDVASSFFSSVQDCLLLLSAEE
LLLTVFQLTAQDQRHTHLSKSLLDKLKTVCVAGVQSLVQHCEYEVAEGGFLHSAAVWVVK
QVLTVPLDIKSLQVLVMAVQSLVETIISAGNQASPILNHLFNLLTPSQTEWTRIREALPS
QWIKTPLLANRHRGVCEKPSQDTWKFRELNRLPAHLCVCALLGRVAQTASRDQKETQCPS
PLPNLTNTVSELLYALQWCKELKYSPTVVSAYHNLLAEWGLSDGHHNQVPMKPLLQILYS
RSVMDGGLWSLTLENYINTNNLAITHGAALRGLYGSSDSLFPVSQSKLSTVQVLCPVMTK
EDKETLVALATAGLINWQENDDVYGCLAVLLCCLNANTQVEDEVVQAILATLMEWRNSRE
DWFLFSCNLAEATSEQLNLNVEMMRFLTWLVTHRPSVLGGNQWDFLLCSMLAWLETASEN
VSSLWNPWVQLFVCENSALIVKLNQFFTSSSSGVLEKLPSELASEWRDFFVDGIYNLLLP
LPVKITEAFIEPDDPVFPLSVLQSVGLALTHVPVQQLTQNSLPPRFIADQKTNLPEPLQT
LLNTLCPLLLFKARPLQITVHHVLEKVMPQLPECDGDGDSKSDDDKDELCLSPPASLMAI
LSTCEELCDNILAGVQVGEFAVVQPLSVEYSCVLGYLLAWKLLLTFFKSSPSHLRAHYAQ
YLKRSCSLNKLLLHLFKLMPENPVYPGQESETKETKTFFTETLILTVDENDSVKWELPHL
ACSVYYSTVQDLPAMVRLWWNSQEKRVSSAVEKFTSKYVSPVLSAQEISSVYSSTQMFDS
MTVKARSAAREVIATYSVDDIYIELVIQLPQNYPLSSIAVESGRRVGVAVQQWRNWMLQL
STYLTHQNGSIMEGLALWKNNVDKRFEGIEDCMICFSVIHGSNYSLPKKACRTCKKKFHS
ACLYKWFTSSNKSTCPLCRETFF
NT seq 5292 nt   +upstreamnt  +downstreamnt
atgggcggtaagaacaaacagcgaacaaaaggaaatgttcggccgtccagcagcggccga
gctgcagaggttctgacccgggaaggtggtgtcatcccgggcttcgtgggcttcgacact
accgtcacttcggagctgagctacgtcccggctgtccacggagcggaggaaatagacaac
ctggtggatgctgatttccgcttggtgctcaggaaactctccaagagggatgttgtcacc
agactgaaggctgtgcaggattttgggtccatgtgtcaggaacgggatgctgaagaggtg
aaaggagtcctaccgtactggccaagaatctactgcaaaatatcagtggatcacgatcgc
cgaatcagggaggccacccagctggcctttgagcagctggtgctaaaagtgcgtcgcagc
ttggcgccctttctgaagagtctgatgggccactggattctgtcccaatgcgacacttac
acacctgcagcctctgctgcgtgcaaggccttccaagctgccttctcacccaccaaacag
cccgaggctctcagcttctgcaaggatgagatccttaatgtacttcaagatattttgtta
aaagaaactgcaaacacacttagtgacccacaaagtgtgaccgaggaagagagagaatcc
aaatacgtgcgcatgctgaccagttccctgttgggggtgaagagactgctttcactgctg
cttcagaccgacaggggagccttggagccaggactggcacagctggtcaactctgggaag
ttctggaagtacagcaaacacaagacaccgcaggtgagaggggccttttttgagatggtg
tgtgctctgtgcgagttcactcctgctctggtccaagctgaagcgacacgactctgccct
gctgttctcctcagcatcgacgacacagaccctgttgtgctgcctcccgtgtgggaagct
gttcttcacgttgtgtctacaatccccgactgctggacacatgtaaatgccaaaaaaggc
ttcctacctaaactttgggctttattaaaagaggggggtaaaggcatggctaaagcgctg
cacccaaatctaatgcctcttcttagcaaactgccccaacaagtcactgatcccagcctg
gacttttacaccactttcttcactgcgttcatgcagggtctgtctagtgagcgtgccgtg
acaagcccatcagaaagtgccataatagtgacatcttttgtcgagtgcttgaggtactgc
atactgcaaaatgcagaagaagaacattcccaggagaaaatcaggacaacgcttgtttca
cagcagcttctgcctttattagaaaaggctatcagaaatccttcccttcagaatggccct
cttttccttttggtcactgagatgctcgtttcctgggagagaagggcaggtttacacagt
gaagatgaggaagactccaagaaggaagtctttgaacggcttctggctgacttctgggag
gacatttgtcatttgtgtgtgggttttgttgacaacgaggaagcagatccacaggctttg
gagggtgtagccattttgcttcaggtgatgcgttatcctgagagagtaagcaaaaaacac
cttcagaagaagaaatctgtcagggtgtgtttgtctaagccagaagaggatgaaaaaact
ggtgttcagggggatggtgcagaaaagcttgtgcagacggcgtcggagcttgtgaatgaa
aaagcattcgggtccctacagacgcagcattttgaagacgccgtgtgccagctggcacag
ctgtgcctggtgcatgtgaatgagaaaaactcagagaaacatcttattttcctctcactt
ctcctgcagtccttccacacatcaagggtgttcggtgccttagttgaatttgatgaaaaa
ataccagaagctggtcaatggagggatgagaagaatcctgcagttcagttcctgctgaag
ggagcagttgtgtggctggctgaggtggggcgcagcaacactgagcacctggtggagatg
gtttttagttcactctgctgctgcaaccaggaggagaccactcgtatcctcaaccacatc
accacgatgggtttgcagtggggaattatcctgcaaattatccaaagggcctgtaaagat
gctgagactcgtgcgagctgcgctgattggctgaaaggttcaattctgggtgagcagctc
ttgggactgactgaggagctctgcaaggtggggagcagctctcgtgcttccacgtcgtct
acaagctgccacagttgggcgcttatcagcctcgtcctctctcagaaccacaacaatgag
tctttgattggggaggtatacatggagatgatcttagaaaagcttcacaccactctaacg
gagaccaagagtttgtccgacgcaggcaacatggaacccctcatctccttcatatgcgac
gtggcttcttccttcttctcctctgtacaagactgtcttctgctgctctcagccgaggag
ctgttgctcaccgttttccagctcactgcccaagatcaaagacacactcacctgtccaaa
tccctgttagataagctgaagacagtgtgtgttgctggagtccagtcactggtgcaacac
tgtgaatatgaggtggcagaaggtggtttcctgcacagtgcagctgtttgggtggtgaag
caagtactaacagtccctctggatatcaaaagtttgcaggttttggttatggctgtacaa
agcttagtggaaacgatcatctctgcaggaaatcaggcttcccccatcctgaaccactta
tttaatcttctgacacccagccagacagaatggacaagaatcagagaggccctgccttct
cagtggatcaaaactcccttactggccaatcgtcacaggggagtttgtgaaaaaccttct
caggacacttggaagtttagggagttaaacaggctgcctgcccacctttgtgtctgcgcc
ttattgggaagggtggcccagaccgcttcacgtgatcagaaggagacacagtgtccttca
cctctgccaaaccttacaaacacagtttcagaactgctgtatgctctgcagtggtgtaag
gagcttaaatacagccccacggtggtatctgcgtatcacaacctgctggctgaatggggg
ctgtcagatggacaccataaccaggttccaatgaaacctctcctacagatcctctactca
aggtccgtaatggatggaggtctgtggtctctgactctagagaactacatcaacacaaac
aacttggcaatcactcatggtgcagctctgaggggactttatggtagttcagacagtctg
ttcccagtgtctcaaagcaaactgagcacggtccaggtgctctgcccagtcatgacaaaa
gaagacaaagaaactctcgtcgctttggccaccgctggattaatcaactggcaagagaac
gatgatgtatatgggtgtctggcagtgctgctgtgctgtctgaatgccaacacacaagta
gaggatgaggtcgtgcaggctatcctggccacgttgatggaatggaggaacagcagggag
gactggttcctctttagctgtaacctggctgaggctacatctgaacagctgaaccttaat
gtggagatgatgcgattcttgacttggctggtgactcatcgtccatcagttcttggagga
aaccagtgggacttcttgctttgctccatgttggcctggttggagactgccagtgagaac
gtgagcagtttgtggaacccctgggtgcagctgtttgtgtgcgagaactctgcgttgatt
gtaaaactgaaccaattcttcacgtcgtcttcttctggcgtgctggagaagctgccatca
gaactggccagtgaatggagagatttcttcgtagacggaatctacaacctgctgttacct
ctgcctgttaaaatcactgaggccttcattgaaccagacgaccccgtgttccccctgtct
gtgctgcagtcggtcggtttggctctgacacatgtaccagtgcagcagctgacccaaaac
tccttgccgccacggttcatagcggaccaaaagacgaacctgccagagcctctgcagacg
ctcctcaacactctgtgccctctgctgctgttcaaggccaggcctctgcagataactgtg
caccacgtgttggaaaaggtcatgcctcagctgcctgagtgtgatggagacggggacagc
aagtctgatgatgacaaagacgagctgtgtctttcccctccagcttcgctcatggccatc
ctgtcgacctgcgaggagctgtgcgataacatcctggctggagtccaagtgggagagttc
gcagtggtccagcccctcagtgtggagtactcttgcgtcctgggctacttgctggcgtgg
aagctgcttctcacatttttcaaatcttccccctcccacctgcgtgcccattatgctcag
tatctgaagagaagctgctctcttaacaagctgctcctccatctcttcaaactgatgccc
gagaacccggtttatccaggacaggagtcggagacgaaagagaccaaaaccttctttaca
gaaaccctgattctgacagttgacgagaacgacagcgttaagtgggagctccctcacctg
gcgtgcagcgtgtactacagcaccgtgcaagacctgcctgccatggtgcggctgtggtgg
aacagccaggagaagagggtgagctcagccgtggagaagttcaccagtaaatacgtcagt
cctgttctctcagcccaggagatctcgtccgtctacagcagcactcagatgtttgacagc
atgaccgtgaaggctcgctcagcagcacgagaggtgatcgctacctactctgtggatgac
atctacatcgagttggtgattcagctgccacagaactaccctctgagctctatcgctgtg
gagagtgggcggcgtgtgggcgtcgccgtgcagcagtggaggaactggatgctgcagctg
agcacctacctcacacatcagaatggcagtataatggagggcttggctctgtggaagaat
aatgtcgacaagcgattcgagggaatagaggactgcatgatctgcttctctgttattcac
ggctccaactactctctgccaaaaaaggcttgccgcacctgcaagaagaagttccactcg
gcatgtttgtacaaatggttcacttccagcaacaagtccacctgtccgctctgcagagaa
acgttcttttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (23)   

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