KEGG   Kryptolebias marmoratus (mangrove rivulus): 108237279
Entry
108237279         CDS       T05608                                 
Symbol
rnf40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B
  KO
K10696  E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:kmr04121]
    108237279 (rnf40)
Enzymes [BR:kmr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108237279 (rnf40)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   BRE1 proteins
    108237279 (rnf40)
SSDB
Motif
Pfam: zf-C3HC4 BRE1 zf-C3HC4_3 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-RING_5 SpoIIE
Other DBs
NCBI-GeneID: 108237279
NCBI-ProteinID: XP_017274100
UniProt: A0A3Q3AIT2
Position
LG17:complement(13928802..13943544)
AA seq 1005 aa
MSGAGGGKRPSGGDSPPGPPEKKSKKEEKTTTTLIEPIRIAGVSSTEEMDMKVLQFKNKK
LCERLEQRQAMEDELREKIEKLEKRQATDDTTLLIVNHYWSQLEETVSVLRKCIEPEAPA
ASAPVPPSTPLPIATPVEDNGVGLALPTSAVPPPPLPEAQSEAEQTEPRPQQEEQRENHQ
EEQHPPPLPGSDELMTPTEPPQDSKTDASPPSPPLSENAKGFLATLEQSSEEELSLHLQD
RMQFSKEAIAHLVRVFDRLHGRIDDMCRAIQAAVCQDDNQSDLSLKHTLLEENNRLRDLA
TLLQGRHHKMSLEYNELVDKVTSAETKVSEMETTVEDLQWDIEKLRNREQKLNKHLAEAM
EQLKSGYSSTGSSGGLAGGQITLNIQKFESLNAELEHNQELANSRMAELEKLQVELQEAV
RESEKLKMDLRNIPEEVVKETSEYKCLQSQFSLLYNESLGVKTQLDEARALLLTAKNAHL
RQIEHMESDELSLQKKLRTEVIQLEDTLAQVRKEYEMLRIEFEQNLAANEQAGPINREMR
HLISSLQNHNLQLKGDVQRYKRKLRETQMEINKLRCQSGDTGVLILEETTSDGSDIKKEE
DDDQEEEEEEERRKELERQRAREREREREAERERERERDRERQRSDELKRKDSDTLKMLR
VDLKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAERKSKAEVDDLRMRVRELEERERK
ESKKLADEDALRKIRVAEETIEHLQKKLAATKQEEEALLSEMDVTGQAFEDMQEQNSRLL
QQLREKDDANFKLMSERIKSNQIYKLLKEEKEELADQVLTFKTQVDAQLLVVQKLEEKEG
VLQSTLAALEKELTVRTQALELNKRKAVEAAQLAEDLKVQLEHTQAKLKEIQVSVAENRT
ARERESSNLKRAQEDLSRLRRKLEKQKKVEVYSDADEILQEEINQYKAKLRCPCCNTRDK
ETVLTKCFHVFCYECLKMRYDTRQRKCPKCNCAFGANDFHRIYIT
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgtcgggtgctgggggaggaaagcgtccctcgggaggggacagtcctcctggcccacca
gagaagaagagcaagaaggaggagaagaccaccaccacactcattgaaccaatacgcata
gctggagtctcctccacggaagaaatggacatgaaagtactccagttcaagaacaagaag
ctgtgtgagcgcctagagcagaggcaggcaatggaggatgagctacgagagaaaattgag
aagctggagaagaggcaagctactgacgacaccaccctcctgattgtcaaccactactgg
tcgcagctggaagagaccgtaagtgttttgcgcaaatgtatcgagccagaagcgccggcg
gcgtctgctcccgtcccgccctcgacgccgctccccatcgccacaccagtggaggacaat
ggtgtcggcctggctctgccgacctccgcagtgccccctcctccattgccagaggcccag
agtgaggctgagcagacagaaccgcggccgcagcaagaggagcaacgggagaaccatcag
gaggagcagcacccgcctccccttcctgggtcagatgagttaatgacaccgacagaacct
ccgcaggattcaaaaacagacgcgtctccaccttcccctcccctgagtgaaaatgcgaag
ggttttttggccacgctggagcagagcagcgaggaggagctgtccttacacctccaggat
cgcatgcagtttagtaaagaagccattgcccatttggtgcgtgtttttgacaggctgcac
ggtcgtatcgatgacatgtgcagggcgattcaggctgcagtatgtcaggacgataaccag
tcggacctcagtctgaaacacacgctgctggaggagaacaaccgtctgcgagatctcgcc
accctgctgcagggacgacaccacaagatgtccctggagtacaacgagttggtggacaaa
gtgaccagcgcagaaacaaaggtgtctgagatggagacaacggtggaggaccttcagtgg
gacatagagaaactccgcaacagggagcagaagctcaacaaacacctggcagaagccatg
gagcagctaaaatctggctacagcagcactggcagctcaggagggctagctggaggtcag
ataaccctgaacattcagaagtttgagagtctcaacgcagagctggagcacaaccaggag
ttggccaacagccgcatggcagagttggagaagctgcaggtggagctccaggaggctgtg
agggagagtgagaagctcaagatggacctgcgcaatatcccagaagaggttgtgaaagag
acctccgagtacaaatgtctgcagtctcaattttctctgctgtacaacgaatctcttggg
gttaaaactcagctggatgaggctcgggctctcctgctgactgcgaagaacgctcatctt
cgtcagattgagcatatggagagcgacgagctgtcccttcagaagaagctgaggaccgag
gtcatccagctggaggacaccttggcccaggtgcgcaaagagtacgagatgttgcgcatc
gagttcgagcagaacctggcggccaatgaacaagcaggaccaatcaacagggagatgcga
cacctaatcagcagccttcaaaaccacaacttgcagctgaaaggcgacgtgcagcgctac
aagaggaagctgcgtgaaacacagatggagatcaataaactgcggtgccagagtggcgac
acgggggttttgatcctcgaggagacgacgagcgacggaagcgacatcaaaaaggaggag
gacgacgaccaggaggaggaggaggaggaggagaggaggaaggagctggagaggcagcgg
gcccgagagcgggagagggagcgagaggcggagcgcgagcgggagagggagcgcgacagg
gagaggcagcgcagcgacgagctgaagaggaaggactcggacacgctgaagatgctcaga
gtggatctcaagaaagcccaggagtcccagaaggagatgaagctcctgttggacatgtat
aaatcggctccaaaggagcaacgggacaaagtgcagcttatggcagctgagcgcaaatct
aaagcggaggtggacgacctgaggatgcgcgtgcgggagctggaggagagggagaggaag
gagagcaagaagttggccgacgaagacgccctcaggaagattcgtgtcgccgaagagacg
atcgagcacctgcagaagaagctggctgccaccaagcaggaggaggaggccctgctgagt
gagatggacgtaacgggccaggccttcgaagacatgcaggagcagaacagccggctgctg
cagcagctccgggagaaggacgacgccaacttcaagctgatgagcgagcgaatcaaatcc
aaccagatctacaagctgctgaaggaggagaaggaggagctggccgaccaagtgctcacc
ttcaaaacccaggtggatgctcagctgctggtcgtgcagaagctggaggagaaagaggga
gtcctccagagcacgctggctgctttggaaaaggagctgactgttcgaacacaggccctg
gagctcaacaagaggaaggcggtggaggccgcgcagctggcagaggacctgaaggtgcag
ctggagcacacgcaggccaagctgaaggagatccaggtctccgtggctgaaaaccgcacc
gcccgagagagggagagcagcaacctgaaacgagcgcaggaggatctgtccaggctgagg
cggaagctggagaagcagaagaaggtggaggtgtactcggacgcagacgagatcctgcag
gaggagatcaatcagtacaaggccaagctgcgctgcccctgctgcaacacgcgagacaag
gagaccgttctcaccaagtgtttccacgtgttctgctacgagtgcctgaagatgcgctac
gacacccggcagaggaagtgccccaagtgcaactgtgcctttggagccaatgactttcac
cgcatctacatcacctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

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