KEGG   Kryptolebias marmoratus (mangrove rivulus): 108240408
Entry
108240408         CDS       T05608                                 
Symbol
ranbp2
Name
(RefSeq) E3 SUMO-protein ligase RanBP2 isoform X1
  KO
K12172  E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03013  Nucleocytoplasmic transport
kmr03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    108240408 (ranbp2)
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108240408 (ranbp2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmr03019]
    108240408 (ranbp2)
   03110 Chaperones and folding catalysts [BR:kmr03110]
    108240408 (ranbp2)
   04121 Ubiquitin system [BR:kmr04121]
    108240408 (ranbp2)
Messenger RNA biogenesis [BR:kmr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     108240408 (ranbp2)
Chaperones and folding catalysts [BR:kmr03110]
 Protein folding catalysts
  Peptidyl prolyl isomerase
   Cyclophilin
    108240408 (ranbp2)
Ubiquitin system [BR:kmr04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   108240408 (ranbp2)
SSDB
Motif
Pfam: Ran_BP1 IR1-M zf-RanBP Pro_isomerase WH1 TPR_16 TPR_2 TPR_1 TPR_7 TPR_8 DUF1681 PPR_1
Other DBs
NCBI-GeneID: 108240408
NCBI-ProteinID: XP_017279336
Position
LG6:complement(7406555..7425527)
AA seq 3069 aa
MRRSKAEVDRYVSSVQNSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSEYLRVQERDP
KAHKFLGQLYEREGDVNKAVGCYKRSVDLNPVQKDLVLKVAELLVDKKECDSRAEFWVEK
AAKLMPGHPEVFNLKERLLSRQGQQGWNQLFDLLQAELAARPADAHVNVKLVQLFCQDGR
LDEAVKHCLAAEKRGLLRNSLDWYTVVLHTLQEYLAQPSVSNNEKMCRRLQREVLLTHCS
LLRITLTDSSVHASLDAFRGFDQAMQMLSSTANRHTDDLFEVFMELRGHLYLHAGTLLLK
LAHDRQQTWRAVNDLSALCYLVAYQVPRPKSKVTKRDLSAPQLLELLANDRQSQAGHMLF
NLSSDSSALIREVVEAFGNPGGQESVFELLWGPQASPGSSFIAGDDIRSICAVAPELSKL
TRWDTGSILLHSGELQHLSWLGLQWTLLGQRPPMRDWLQQLFPRLTLETSKLDTNTPESI
CLLDLEVFLYGVVFCSHCQLQDTAKISRGMSPQQQQLFEPRCLPVPLLRLLTTDRQREWW
DAIYSLIHKRAVPGTTAKLRMIVQHGLNSLRAGEKHGLQPALAIHWARTLSQTGDGMNSY
YDQKEYIGRSVHYWRVVLPQLEKIKNRRSIAEPLDPLFLHFHSKDIQISAVKGYEEEAKI
AYAVLLDIEGRTEEAIATLESISNLSSSWHLAQIYQRLAEEASNGVEETQDRCITFLRKF
RNYLSKIYNANAEDIDKLPVSMEEVVDLLNDVNQQLGETGEDMDEENGKELDHQRGLAHS
SPAHPAETSAAISHIKFSTPSPNKSIVSPSKRLISPKTPPHWVEDQKSLLQMLCQQVEAL
KNEVHDLKHNSSGNAGSPHKLYGEGYRAECLQDSFTPVQSYHGAPLTVATTGPSLYYNQS
PAYNSQYLLRTAANVTPTKGPMYGVNRMPPQQHMYSYQPPTHTPPLQTAPACIYPPQDQA
FGAPLRFESPATSLLSPYSEEYYGQSVAQQTTNPSLPEPGYFTKPSVVPVQPPKNIEGKS
MDFGKLSFSQYAPPEVPRVPSFGSGPAAQSTPSTAFKFNSNFKSNDGDFTFSASQAKHSE
SLLGLLTSDIPSKTDAVPEKPPAQEQPSSQTSIFTFGNKNITSFSFTDSTQNTGSLFGKV
DQPFKFGDVTKPVFGLGKPTEQEKPAESDNDSTHGDEDEDGPHFEPIVPLPDKVDVKTGE
EEEEEMFCNRAKLYRFDTDTKEWKERGIGNVKILKHNTKGKVRLLMRREQVLKICANHYI
NADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEAALFKAKFEEAQRIVPKS
PEKQNQQEKKEESSKDSESLVAQFALKEGEWECPVCCVRNKPTDMRCAACQLANPQSSAK
PETQTAGETKPSTYTFKFGTDSSKPSSSGSTFSGFGAFGASIPSSFTFGTSSSKPADTAM
NTFGFGSQFGKKPEQWDCKKCLAKNEASADSCVSCKAPKTAVKTSVIAQTTPATTTPAVQ
PSVSVTDSGISAQFSKKPGQWDCDVCEVRNEASADKCVACKSLNPAAKSTDGAPVASNIP
AASGFGSELPKKDGQWDCNACLVRNKASATECVSCHAPNENPSLAAMFAMKEGEWDCDTC
LVRNKASADKCVACQTPNPNAKSTSSSASSASAFNFSFGTKTSSSQPSATAFTMPFVSGS
TFQFGQNKEKSSDSSFKFEAPQSVPTTTGSTGFSFSMPIPAGGFKFGIQDPAKDSASSNE
QTPSGSASSLLKTIADKHKEKDNPSVSSEDQPEKDENPLIAGKANTFSFADLAKSSGGSF
QFGQNDPNFKGFSGAGEQVFSSFQTTPTKAETSNHQEDDGMYKTEDHDDIQFEPVVQMPE
KVDLVTGEEDEQVLYSQRVKLFRFDAAASQWKERGVGTLKFLKNNTNGRLRVLMRRDQVL
KVCANHWITTTTNLKPLAGSDKAWIWMANDFSDGDAKLEQLAAKFKTTELAEEFKQKFEE
CQRLLLDIPLQTPHKLVDTGRTAHLIKKAEEMKTGLKDLKSFLTDEKTKIKDEDNQGDVA
TSGEVSGLVIRPHGETTGPSLEWDNYDLREGALDETADSSVYATPVSSSPLRKNLFRFGE
STGGFSFSFQPGISPSKSPAKLNLSRASVGTDEEQDNTQDEERDGQYFEPVVPLPDLVEI
STGEENEQVVFSHRAKLYRYDKEVKQWKERGIGDLKVLQNYDTKRVRLIMRRDQVLKICA
NQWITAMMRLEPMMGAEKAWVWSALDFAEEGEGKIEQLAVRFKLQDTANTFKQVFEEAKV
AQEKGELMTPVTFRTTAGQDSGTAAPENTAAAVCGTAAIAVLEETTKERTEPPTDIGPSP
AGPQSPINPSKTVVSPPKFVFGIDSLQKIFGTQRALSEAQTSGSGLKTSDAESLVKPPSA
APAFKMNTGLDFRLFKDNPMAFWTNTSTIQFETSAPPRAAGGSLGLDEDSDVEIVYVKEP
TAEQADFARKLLLPLTFFCYKNEPGYVSDDETDDEDYESAVRALNGKLYPDPPEAAASGE
DVVSQQACVRLSEPDCQVVWEKKPTPEEEEKAKSLQLPPTFFCGLSTTDSDPDNDKPEDF
ETEVRKAHQDLVAQLKGAEPASGSPAAPPEDPASGPSSSSPEASGSRSTSEEQTSNKPAE
TRSETPSGSFPIDLSTKKSPEPKTKMGTGAASLAATTAGPDFGFSSPGGFSFADLAKNTE
GFAFGTQDDNFSWANAGAMVFGASVSSEAKNEADEEGSDEEDAPKNVDIHFEPIVSLPEV
ETKSGEEDEEILFKKRARLYRWDRDLSQWKERGTGDIKILFHPAKHFYRILMRRDQVMKV
CANHTICQSMEIKPMNASDTALVWTATDYSDGEGVVEQLAAKFKTPEITESFKKTFCECQ
RRMGQTTEDGSGVLSQMSGVQEHSKETNPKVFLTVAADGEPLGTITIELFSNVVPKTAEN
FRALCTGEKGFGLRDSIFHRVIPDFMCQGGDITNSNGTGGKSIYGSTFEDENFDVRHTGP
GILSMANRGRDTNNSQFFITLKKAEHLDFKHVAFGWVRDGMDVVQQMGQLGTKGGPPTKR
LVITDCGKL
NT seq 9210 nt   +upstreamnt  +downstreamnt
atgcggcggagcaaggcggaagtggaccgctacgtttcatctgtacagaattcctctcct
tcactcaaagagaagccagtgaaaggatttttattcgccaagttgtattttgaagcaaag
gaatatgaacttgcgaagcggcacgtgtcggagtacctcagggtacaggaaagggatccc
aaagcacacaaattccttggacagctctacgagagagagggagatgtcaacaaagcagtc
gggtgttataagcgctcggtggacttgaacccggtgcagaaggacctggtgctgaaggta
gccgagttactcgttgataagaaagaatgtgacagcagagcagagttttgggttgagaaa
gctgcaaagctcatgcctggacacccagaggtcttcaacctgaaggagcgtctgttgagt
cgtcagggccagcagggctggaaccagttgttcgacctcctccaggctgagctggcggca
cggccagctgatgctcatgtgaacgtgaagctggttcagctgttctgtcaggatggtcgg
ctcgacgaggctgttaaacactgcctggctgctgagaagagaggcctgctgcgcaacagt
ctggactggtacaccgtggtgttgcacacgctgcaggagtatctggctcagcccagcgtt
tcgaataatgagaagatgtgtcgacgtctccagcgagaggtgttgttgacacactgcagc
ttgctgagaatcaccctgacagacagcagcgtgcatgcgagcctagatgcattcagaggt
tttgaccaagcaatgcagatgctgagcagcactgccaaccgccacactgatgaccttttt
gaagtcttcatggagttgagaggtcacctctacctgcatgctggcacgctgctgttgaaa
ctggctcacgatcggcagcagacgtggagggctgtcaatgacctgtctgcgctgtgttat
ctggtggcataccaggtccccagaccaaaatcaaaagtgaccaaaagagacctgtcggcc
ccgcagcttctggagctgctggcaaacgaccgacagagtcaggctggtcacatgttgttc
aacctgagctctgattcgtccgctttgatcagagaggtggtggaggcgtttgggaatcct
ggaggtcaggagtctgtgttcgaactcctctggggtccgcaggcctcccctggatcctct
ttcatagccggtgatgatattcgctccatctgtgccgtggctccagagctctccaaactg
accagatgggacacgggctccatcctgttgcacagcggtgaacttcaacatctcagctgg
ttgggactgcagtggactcttctgggccagagaccacctatgagggactggttgcagcag
ctttttccacgacttacactggagacgtcaaagctagacaccaacacaccagagtccatc
tgtctgctggatctggaggtgtttttatacggcgtggtgttctgcagccactgtcagctc
caggacacggcgaaaatcagcagggggatgagtccgcagcagcagcagctctttgagcct
cgctgcctccctgttcctctcctccgcctcctgaccaccgacagacagagggagtggtgg
gacgccatctacagcctcatccacaagcgagcagttcccggtacaacagccaagctgcgg
atgattgtgcagcatggactgaacagtctgagggccggagagaaacacgggctgcagcca
gcgctggctatccactgggctcggactctcagccagacgggagatgggatgaactcgtac
tatgaccagaaggagtacatcggccgcagtgttcattactggagagttgttttgcctcag
ctggaaaaaattaaaaacagaaggagtatagcagagcccctcgaccctctcttcttacac
tttcactccaaggatattcagatttctgctgtgaaaggttacgaggaggaagccaaaata
gcatacgctgttctcctggatatcgaaggcagaaccgaggaggcaatcgccactttggaa
agcatcagtaacctgtcctcctcctggcatttggcacagatctatcaacggctggcagaa
gaggccagcaatggggtggaagagactcaggacagatgtataactttcctgagaaagttc
aggaattatctgtcaaagatctacaatgccaatgcagaggatatagataagcttcctgtg
tccatggaggaggtggtggacctcctgaatgatgtaaaccagcaactaggggagactggg
gaggacatggatgaagagaatgggaaggaactggaccatcaaagaggactagctcactct
agccctgctcatcctgcagaaaccagcgcagccatttctcacatcaagttttctactccc
tctccgaacaaaagcattgtttctccttccaaaagactgatttcaccaaagacaccacct
cattgggttgaggaccagaaaagtctccttcagatgctctgtcagcaggttgaagctctc
aagaatgaggttcatgatctgaaacacaactcttcagggaacgcaggctctcctcataag
ctatatggggagggctacagggcagaatgcttgcaggactctttcacccccgtccaatcc
taccatggagcccccctaacagttgctaccacaggtccctctctgtattacaatcagtct
ccagcttataactctcagtatcttttgcgcacagcagcaaatgtaactccaaccaagggt
ccgatgtatggtgtgaaccgtatgccacctcagcagcacatgtattcctaccagccgccc
actcacacacctccattgcagacagccccagcttgcatctaccctccgcaggaccaagcg
ttcggtgcccctcttcgatttgaatcaccagccacaagccttctttccccatatagtgaa
gaatattatggccagagtgttgcccagcaaaccactaacccatctctgcctgaacctggg
tacttcaccaagccctctgtagtccctgttcaacccccaaagaatatcgaggggaagtct
atggactttgggaagctttccttcagccagtacgctcctcctgaagttcccagagtaccg
agctttggttcaggaccagctgcccagtccacaccttcaacggctttcaaattcaattcc
aattttaaatccaatgatggcgattttactttctcagcttctcaagccaagcacagtgaa
agtttgcttgggctgctcacatcagacattccctcaaaaactgatgcagttccagaaaag
cctccagcccaggagcagccctccagtcaaactagcatcttcacctttggcaataaaaac
atcaccagcttctcatttactgattccacacagaacactggaagtctttttggaaaagtg
gatcagccatttaaatttggagacgttaccaaaccagtgtttggccttggtaagccaaca
gagcaggaaaaaccagctgagagcgacaatgatagcacacatggggatgaagatgaggat
ggtcctcacttcgaacctattgttcctcttcctgacaaggttgatgtgaaaacgggtgaa
gaagaggaggaggaaatgttttgcaacagggcaaagttgtatcgatttgacactgacaca
aaagagtggaaagaaagaggcattggtaatgttaaaatcctgaagcacaacactaaaggg
aaggtccgcctcttgatgagaagggaacaagttcttaagatctgtgcaaaccactacatc
aatgctgacatgctgttgaaaccaaatgctggctctgacaaatcctgggtgtggaatgcc
attgattatgcagacgaagagcctaaacctgaacaactggccattcgcttcaaaacagta
gatgaggcagctcttttcaaagctaagtttgaggaagcccagagaattgtgcccaaatca
cctgaaaagcaaaatcaacaggagaagaaggaggaaagttcaaaagactctgaatcttta
gtagcccagtttgcactcaaagaaggagaatgggagtgccctgtgtgctgtgtgagaaat
aaacccacagatatgcgctgtgcggcatgtcaacttgccaatccacaatcttcagcaaaa
ccagaaactcagactgctggggaaaccaaaccaagtacatatactttcaaatttggtact
gattcatcaaagccaagcagttctggctctacattttctggttttggtgcttttggagcc
tctataccatcctcctttacgtttggcaccagttcctcaaaacctgcagacacagcaatg
aatacgtttggctttggatcacagtttggtaaaaagccagagcagtgggactgtaaaaag
tgtttggcaaaaaatgaagcctccgcagacagttgtgtttcatgtaaggctcctaaaact
gcagttaaaacatctgtgatagcacaaactacacctgctacaactacacctgcagtacag
ccctctgtatctgtcactgactctggaatcagtgcacagttcagtaagaagcctggacag
tgggactgtgatgtatgtgaagtaagaaatgaagcatctgctgacaaatgtgttgcctgt
aaaagtctaaaccctgcagcaaaatctactgatggggctccagtagcatcaaatattcca
gcagcatcaggatttggctctgagcttcctaagaaagacggacagtgggattgcaatgcc
tgcctggtcagaaataaagcgtcagctaccgaatgcgtttcctgccatgctccaaatgaa
aatccttctttagcagccatgtttgccatgaaggaaggagaatgggattgtgacacttgt
cttgtcagaaataaagcctctgctgataaatgtgtggcctgtcagactccaaatcctaat
gctaaaagcacaagcagctccgcttcctcagcctctgccttcaatttctcctttggaacc
aagacctcatcaagccagccttctgcaactgcgtttacaatgccttttgtaagtggcagt
actttccagtttggtcaaaacaaagagaaaagctcagatagctctttcaaatttgaagct
cctcagtctgtacccaccaccacaggttctacaggcttctctttctcaatgcccattcca
gctggtggcttcaagtttggcattcaagacccagcaaaagattcagcttcatccaatgag
caaacaccatccgggtcagcctccagtctcctgaaaacaatagccgacaaacataaggag
aaagataacccgtctgtatcttctgaggaccaaccagaaaaagatgagaatccattaatt
gctgggaaagccaatacattcagttttgcagacttggcaaaatcctctggagggagcttc
cagtttggccagaacgatcctaatttcaaaggtttctctggggctggggaacaggtgttc
tcatcattccagacaacccccaccaaggcagaaacctcaaaccatcaggaagatgatggg
atgtataaaacagaggatcacgatgatatccagttcgaaccagtggtccagatgcctgag
aaagtggacctggtaacgggcgaggaggacgaacaggttctgtactctcagcgcgtcaaa
ctgtttagatttgacgccgccgccagccaatggaaagaacgtggtgtgggaaccctcaaa
ttcctaaaaaataacaccaatggtcggctaagggtgctgatgagacgagatcaagttctg
aaggtttgtgccaaccactggatcaccaccaccacgaaccttaagcccctggcaggctca
gacaaagcatggatttggatggccaatgacttctcagatggagatgctaagcttgaacag
ttggctgctaaatttaaaaccacagagctcgctgaagagtttaagcagaagtttgaagag
tgtcagcggcttctcttggatattcccctgcaaaccccccacaagctggtagacaccggc
agaacggcacaccttattaagaaagcagaggaaatgaaaaccggtttgaaagacctgaaa
tcgtttttgacagatgagaaaacaaagatcaaagacgaagacaatcagggagacgttgca
acctcgggggaagtttcaggtctcgtcatcaggccccatggtgaaaccactggccctagc
ttggagtgggacaactatgacctaagagaaggagctttagacgaaactgctgactcttct
gtttatgctacccctgtttccagcagtcccctgagaaagaaccttttccgctttggggaa
tctactggtgggttcagcttcagttttcagcctggcatcagcccttccaagtctcctgca
aagctcaacctgagcagagcctcagtgggtacagacgaggagcaggataatactcaggac
gaagaacgggatggacagtactttgaacctgtggttcctttgcccgatttagttgagatc
tctactggagaggagaatgagcaggtggtcttcagccacagagccaaactgtatcgctac
gacaaagaagtgaaacaatggaaggagaggggcatcggagacctgaaggtcttacagaat
tatgacaccaaacgagtgaggctgataatgaggagagaccaggtactgaagatctgtgcc
aaccagtggatcacagcaatgatgaggctggaacccatgatgggggcggagaaggcctgg
gtctggagcgccttggactttgcagaggaaggagagggtaaaatagagcagctggctgtg
aggttcaagctgcaggacactgctaacacatttaaacaggtctttgaggaggccaaggtg
gcacaagagaaaggggaacttatgactcctgtgacgttccgaactactgcggggcaggac
agcggaacagcagcacccgaaaacacggctgcagctgtctgtgggacggcagcgatcgct
gttctagaagagacgacaaaggaacgtacagaaccgcccactgacatcgggcctagtcca
gcaggacctcagagcccgattaatccttcaaagactgtggtgtctccccctaagtttgtc
tttggcattgatagcctccagaaaatttttgggactcaaagagctctctcagaagctcaa
acatctggatcaggtttgaaaacctcagatgctgaaagtttggttaagcctccgtctgct
gctcctgccttcaagatgaacacagggctggactttaggcttttcaaagataacccaatg
gctttttggaccaacacatccaccatccaatttgaaacctcagccccccctcgggcagca
ggaggcagcttggggttggatgaggactctgatgtggagatcgtttacgtcaaggagccc
actgctgaacaggcagattttgccagaaagctgctgctgcctctcaccttcttctgctac
aaaaatgagccgggctacgtaagcgatgatgaaacagacgatgaggactatgagtcagca
gtgagggctttgaatggaaaactgtaccctgatcctcctgaggctgcagcttctggtgaa
gacgtcgtctcgcagcaagcttgtgttcggctctcagagccagactgtcaggttgtgtgg
gagaagaaaccaacaccagaggaggaggagaaggcaaaaagtctccagcttcctcccacg
ttcttctgtggcctgagcaccacggacagcgacccggacaatgacaagccagaagacttt
gagacagaagtccgcaaagcgcaccaagacctggtcgcccagttaaaaggagctgagccg
gcctcgggcagtcctgcagcccccccagaagacccggcctccggtccgtcatccagcagt
ccggaggcttcaggcagcaggtctacatcagaggagcaaacctcaaacaagccagcagag
actcggagcgaaacgcccagcggcagtttccccattgacctgtcgactaagaagagtcca
gaaccgaagactaaaatggggacaggagctgcgtctttagctgctacaacagccgggcca
gactttggcttcagttctccgggaggattttcttttgctgacttggctaaaaacacagag
ggatttgcatttggaacacaagacgataatttctcgtgggcaaatgctggtgcgatggtt
tttggagcttctgtgtcttctgaggctaaaaacgaagctgacgaggagggaagtgatgaa
gaggacgctcctaaaaatgttgacattcactttgagcctattgtatccctacctgaggtg
gagacgaagtccggagaggaggacgaggaaatcctgttcaagaagcgggccaggctgtac
cgatgggaccgcgacctcagccagtggaaggagcgcggcaccggagacatcaagatcctc
ttccacccagccaaacatttttatcgaatcctgatgagaagagaccaggtcatgaaggtc
tgcgccaaccacaccatctgccagtcgatggagattaaacccatgaacgcctcagatacc
gcactggtctggaccgccacagactactcagatggtgaaggtgttgtggagcagctggca
gccaaattcaaaaccccagagatcactgaatctttcaagaaaaccttctgcgaatgtcaa
agacgtatgggccaaaccacagaggacgggtcgggtgtcctgtcacagatgtccggagtc
caggagcactctaaagagacaaaccctaaggttttcctcacagtggctgccgacggtgag
cctctgggcaccatcaccatagagctcttctccaatgttgttcccaagaccgcagagaac
ttcagggctctctgcaccggagagaaaggcttcgggctgcgggactccatcttccacagg
gtcatcccagatttcatgtgtcagggtggagacatcaccaacagtaacggcacaggcggc
aagtccatctacggcagcacgtttgaagacgagaactttgacgttcggcacacaggcccg
ggcatcctgtcgatggccaatcgtggacgcgacaccaacaactcgcagttcttcataacc
ctgaagaaagccgaacatctggacttcaaacacgtagcttttggctgggttcgggacggt
atggatgtggtgcagcagatgggacagctggggaccaagggaggccctcctacaaagagg
ctggtcatcacagactgtggcaagctgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (12)   
   Pfam (12)   
All databases (27)   

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