KEGG   Kryptolebias marmoratus (mangrove rivulus): 108242159
Entry
108242159         CDS       T05608                                 
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
  KO
K04834  voltage-gated sodium channel type II alpha
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:kmr04040]
    108242159 (scn1lab)
Ion channels [BR:kmr04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   108242159 (scn1lab)
SSDB
Motif
Pfam: Ion_trans Na_trans_assoc Na_trans_cytopl PKD_channel GPHH ATP-synt_B IQ IQCJ-SCHIP1 Spem1
Other DBs
NCBI-GeneID: 108242159
NCBI-ProteinID: XP_017282302
Position
LG23:complement(14607807..14674301)
AA seq 2013 aa
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRAERRSDEDDENGPKPNSDLEAGK
SLPFIYGDIPPNLVSTPLEDLDPYYTNQKTFIVLNRGKAIFRFNATSALYILNPFNPLRR
LAIKVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLQDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRIVNHNNDSNITLSDTGFNNT
GLNVTGFNSTFNWTEYINDERNYYYIPGRRDALLCGNGSGAGLCPEGFVCIKGGRNPDYG
YTSFDTFSWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAV
VAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEDAQVAAAAATESGEYSGRGGPTSGS
SSGMSRLSSKSAKERRNRRKKRKQREEEERGGCDKFHKSESEDSIKRSSFRFSIDANRLS
YEKRCSSPNQSLLSVRGTLFSPRRNSRASLFSFRGRARDMGSENDFADDEHSTFEESDSR
RGSLFLPRRLERRCSAVSQTSLGVPRIVLPANGKMHCSVDCNGVVSLVGGTSVTTSPVGL
LLPEGTTTDTEIKKRRSGFLQPSMDYLEEPGGRQRAMSVASILTNTMEELEESRQKCPPC
WYRFANTCLIWDCCPAWLKIKEVVSTVVMDPFVDLTITICIVLNTLFMAMEHYPMTKEFD
KVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSV
LRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYK
ECVCKISSDCELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCIIVFMMVMV
IGNLVVLNLFLALLLSSFSADNLAATDEDSEMNNLQIAVGRIQRGISYIKSKVRQFLRSL
CFGSGKGSGLAEESKPLDELHSNGKGNCISNHTQLEITKDPGGVYMMEGNGRPGGGLVVG
VGGDTPGKYPMEECDYMSFIHNPSLTVTVPIAVGESDFENLNTEDFSSDSSDLEGSKEKL
DVDPQPLSSSEGSTVDIRPPGDGVESVELEPEESLDPEACFTEGCIRRFQCCQVSEDVGW
LKSWWNLRKTCFIIVEHNWFESFIIFMILLSSGALAFEDIYIEQRRTIKTVLEYSDKVFT
YVFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSLVANALGYSELSAIKTLRTLRA
LRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCVNIT
DDELLPISVVNNKTECLHSDNNNKTRWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAA
VDSRNVEDQPDYEVNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMT
EEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGFVFDCITKQAFDIVIMILICLNMVTMMVE
TDDQTQDMDRILYWINLVFIVLFTGECALKMISLRHYYFTIGWNIFDFVVVILSIVGMFL
SEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVM
FIYAIFAMSNFAYVKRESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDC
DSQMEHPGNSYKGNCGNPSVAIFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLS
EDDFEMFYEVWERFDPDATQFVEYSKLSDFADALDPPLRIPKPNMNQLITMDLPMVSGER
IHCLDILFAFTKRVLGEGGEMDMLRGQMEERFMASNPSKVSYEPITTTLRRKQEEMSAII
IQRAFRRYMIRQAMKKASALYKEQLKEGVRDPDKDVMVICKFNENSTSDKTDMTPSTASP
PSYNSVTKSDKDKYEKENREKENKGKDLKDKKK
NT seq 6042 nt   +upstreamnt  +downstreamnt
atggcacagctgcttgtaccgcccggaccagacagcttccgccccttcgtccccgagtcg
ctggccgccatcgaaaggcgcatcgccgaggaggaggcccggagaccacgggcggaacgc
cgcagcgacgaagatgatgaaaatgggcccaagcccaacagcgacttggaggcggggaaa
tctctgcccttcatctacggggacatccctccaaacctggtgtcaacccctctggaggac
cttgatccctactacaccaatcagaagaccttcatagtattgaatcgcgggaaggcaatc
ttccgtttcaatgccacttctgccttgtacatcctaaaccccttcaaccctctaaggaga
ttagctattaaagttttagtgcactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgactctgagtaatcccccggagtgggccaagaatgtagagtac
acattcacagggatttacaccttcgagtccctcataaagatcctggccaggggcttctgt
gtggggaagttcacgttcctgcaggacccatggaactggctggatttcagcgtcatactc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactacgaaccttcagg
gttctgcgagctctgaaaacaatatcagtcatcccaggcctgaagaccatcgtgggcgcc
ctgatccagtcagtgaagaagctgtcggacgtgatgattctcaccgtgttctgcctcagt
gtctttgccctgatcggcctgcagctcttcatgggcaacctgaggcagaagtgcgtgcgc
atcgtgaaccacaacaacgacagcaacatcacgctcagcgatacgggcttcaacaacaca
ggcctcaatgtcacgggcttcaattccaccttcaactggacggagtacatcaacgatgag
aggaattactattacatccctggccgtagggatgctctgctctgtggaaatggcagtggc
gcagggctctgtccagagggcttcgtgtgtatcaaagggggtcgtaatccagattatggc
tacacgagcttcgacaccttcagctgggccttcctgtccctgttccgactcatgacgcag
gacttttgggaaaacctctaccagcagactttgcgtgcggctgggaagccctacatgatc
tttttcgtgctggtgatatttctgggctccttttacctcatcaatctgatcctggctgtg
gtggccatggcttatgacgagcagaaccaggccaccatcgaggaggctcagcagaaggag
gaggagttccaggccatgctggagcagctgaagagacagcaggaggatgctcaggttgcc
gcggcagcagccacggagagtggcgagtacagcggcagagggggccccacctccgggtcg
tcctcggggatgtccaggctcagctcgaaaagcgccaaggagcgacgcaaccggcggaag
aagaggaagcagcgggaggaggaggagaggggcggatgcgacaagtttcacaagtctgag
tccgaggacagcatcaagaggtccagcttccgcttctccattgatgccaaccggctgtct
tatgaaaaaagatgctcctcacccaaccagtctcttctcagtgttcgcgggaccctcttc
tcacctcggaggaacagccgagccagcctcttcagtttccgtggccgagcgcgcgacatg
ggctccgagaacgactttgccgacgacgagcacagcaccttcgaggagagcgacagccgc
cgcggctccctgttcctgccgcgtcgccttgagcgccgctgcagcgccgtcagccagacc
agcctcggggtaccgcggatcgtgctgcccgccaacgggaagatgcactgctctgtagac
tgcaacggagtggtgtcgctggtcggtgggacttctgtaacaacctctcctgtaggtctc
ctgctgccggagggaacaacaacagatactgagataaagaagcgtaggtcgggtttcctc
cagccgtccatggactatctcgaagaaccggggggccggcagagagccatgagtgtggcc
agtatcctgacgaacaccatggaagagctcgaagaatccagacagaagtgcccaccctgc
tggtatagatttgccaacacctgcctgatctgggattgctgtccggcatggctgaaaatc
aaagaagttgtcagcacggtggtcatggacccgtttgtggacctgaccataacaatttgc
atcgtcctcaacaccctattcatggctatggagcactaccccatgaccaaagaattcgat
aaagtcctctcagtcggaaacctggtattcactggcatcttcacagcagagatgtgtttc
aagattatcgccctggatccctactactactttcaggaaggctggaacatctttgatggc
atcattgttagtcttagcctgatggagcttggcttggccaacgtagaaggcctgtctgtg
ctcaggtcctttagattgctgagggtcttcaaactggccaagtcgtggcccacgctcaac
atgctgatcaagatcatcgggaactcggtgggcgctctgggtaacctgactcttgtgctg
gccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaagagctacaag
gagtgcgtgtgcaagatttccagcgactgcgagctgccgcgctggcacatgcacgacttc
ttccactccttcctcatcgtgttccgggtgctgtgcggagaatggattgagaccatgtgg
gactgcatggaggtggcggggcagaccatgtgtataatcgtcttcatgatggtcatggtt
ataggaaaccttgtggttctgaatcttttcctggctctcctcctgagctcattcagtgct
gacaacctggcagcgacagatgaggacagcgagatgaacaacctgcagatcgccgtgggt
cgcatccaacggggcatctcgtacatcaagtccaaggtgcggcagttcctccgaagcctc
tgctttggcagcggtaagggctccggtctggctgaggagagcaaacccctggatgagctg
cacagcaacgggaagggcaactgcatttctaaccacactcaactggagatcaccaaagac
cctggtggggtgtacatgatggagggcaacggaagaccagggggagggctggttgtcggg
gtaggtggggataccccgggcaagtacccaatggaggaatgtgactatatgtcatttatt
cacaaccccagcctgacggtgacggtgcccatagctgtgggcgagtcagacttcgagaac
ctaaacacggaagatttcagcagtgactcttctgatctggagggcagcaaagagaagctt
gacgtcgacccacagcctttgagctcatcagaggggagcacagttgatattcgaccccca
ggggatggtgttgaatcagtggagctggagccagaggagtcactggatccagaagcctgc
ttcacagaaggctgcatccgtaggttccagtgctgtcaggtcagcgaggacgtaggctgg
ttaaagagctggtggaacctccgcaaaacctgcttcatcatcgtggagcacaactggttt
gaatccttcatcatattcatgatcctgctcagcagtggagcgctggcatttgaggatatt
tacatcgagcagcggcgaaccatcaaaacagtgctggagtattcagacaaagtgttcact
tatgtcttcatcctggaaatgctgctgaagtgggtggcgtacggcttcgtcaagtacttc
accaacgcctggtgctggcttgacttccttattgtcgatgtgtccttggtgagccttgta
gcaaacgctctgggctactctgagctcagcgccatcaaaactctgaggacactgcgagcc
ctccggcccctgagggccctgtctcggtttgagggcatgagggttgtagtgaacgcactc
ctgggggccatcccctccatcatgaacgtgctcctggtctgcctcatcttctggctcatc
ttcagcatcatgggcgtcaacctgttcgcagggaagtactaccgctgcgtcaacatcacc
gatgacgagcttctccccatcagcgttgtcaacaacaagacagaatgcctgcattcagat
aataacaacaagacacgctggaagaatgtcaaaatcaactttgacaatgtcggggccggt
tatctggctctgttacaagtggcaacatttaaaggttggatggacatcatgtatgcagct
gtcgactccagaaatgtggaagaccagcctgattatgaagtgaacctgtacatgtacctc
tactttgtcatcttcatcatctttggctccttcttcactcttaatctgtttattggcgtc
atcatcgacaacttcaaccagcagaaaaaaaagtttggaggtcaagacatcttcatgacg
gaggagcagaagaaatactacaatgccatgaagaagttgggctccaaaaaaccacaaaag
cctattcctcggccaacgaatgcatttcaaggctttgtgtttgactgtatcacaaagcag
gcgtttgacattgtaatcatgatcctcatctgccttaacatggtgaccatgatggtagaa
acagatgaccagacacaagacatggacaggatcctttactggatcaacctggttttcatt
gtgctcttcactggggagtgtgcgctcaagatgatctctttgcgtcactattattttacc
attggttggaacatctttgactttgtggtggtgatcctttcgattgtaggtatgttttta
tctgaagttatcgagaagtactttgtgtctccaacgctgttccgagtgatccgactcgcc
cgaataggccgcatccttcgccttatcaaaggtgccaagggcatccggacgctcctgttt
gccttgatgatgtcactccctgccctgttcaacattggccttctgctcttcctggttatg
ttcatctatgccatctttgccatgtccaactttgcttatgtcaaaagggagtcaggcatc
gatgacatgttcaattttgagaccttcgggaacagtatgatatgtttgtttcagattaca
acttcagctgggtgggacggactgctggcacccatactgaacaagagggagcccgactgt
gacagccaaatggaacacccagggaactcctacaagggcaactgtggcaacccttcggtg
gccatatttttctttgttagctacatcattatttgctttctcattgtggttaacatgtac
atcgccgtcatcctggagaacttcagcgtggctacagaggagagtgctgagccgctgagc
gaggacgatttcgagatgttctacgaagtgtgggagcgcttcgaccctgatgccacgcag
tttgtggaatacagcaagctgtcagactttgcagatgctctagacccaccgttgcgcatt
ccaaagcctaatatgaaccaactcataactatggacctgccgatggtgagtggcgagcgt
atccactgcctcgacatcctgtttgctttcaccaagcgagtgctgggagaaggtggggag
atggacatgttacgtggacagatggaggagcgcttcatggcctccaacccctccaaggtt
tcctacgagcccattaccactaccctgcgccgcaagcaggaggaaatgtcggccataatc
atccagagagccttccgccgctacatgatccgccaggccatgaagaaggcctccgccctg
tacaaggagcagctaaaggagggtgtccgcgacccagacaaggacgtgatggtcatctgc
aagttcaacgagaactccacgtcggacaaaacagacatgactccttccaccgcctccccg
ccctcctacaacagtgtgacaaagtcagacaaggacaaatacgaaaaagaaaaccgagaa
aaggaaaacaaagggaaagacttgaaagacaaaaagaaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (9)   
   Pfam (9)   
All databases (28)   

Download RDF
DBGET integrated database retrieval system