KEGG   Kryptolebias marmoratus (mangrove rivulus): 108242492
Entry
108242492         CDS       T05608                                 
Symbol
tbpl1
Name
(RefSeq) TATA box-binding protein-like 1
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    108242492 (tbpl1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:kmr03000]
    108242492 (tbpl1)
   03021 Transcription machinery [BR:kmr03021]
    108242492 (tbpl1)
Transcription factors [BR:kmr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    108242492 (tbpl1)
Transcription machinery [BR:kmr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     108242492 (tbpl1)
  RNA polymerase III system
    TFIIIB
     108242492 (tbpl1)
  RNA polymerase I system
    SL1/TIF-1B
     108242492 (tbpl1)
SSDB
Motif
Pfam: TBP DUF3378
Other DBs
NCBI-GeneID: 108242492
NCBI-ProteinID: XP_017282846
UniProt: A0A3Q3AIE5
Position
LG19:12231961..12236864
AA seq 189 aa
MDSSGDEALDIIITNVVATFRTRCHLNLRTIALEGTNVIYKPEDGKVLMKLRKPKITASI
WSSGKIICTGATSEDEAKLGARRLARCLQKLGFKVNFSAFKVVNVLAVCSMPFAVHLIDF
TKNNRPIASYEPELHPAAMYRIKTLKATVQVFSTGSLTVTGPNVQNVAAAVEHIYPLLFE
CQKPKPLCK
NT seq 570 nt   +upstreamnt  +downstreamnt
atggattccagcggcgatgaggcgctcgacatcatcatcaccaacgtggtggccacgttc
aggaccaggtgccacctgaacctgcgcaccatagccttggaaggaaccaacgtcatctat
aagcccgaggatgggaaagtattgatgaaacttaggaagcccaagataaccgcctcgatc
tggtcctcagggaaaatcatctgcactggagcaacaagtgaggacgaagcgaagctgggt
gctcgcaggttagctcgctgtctacagaaacttggctttaaggtgaatttctcagccttc
aaagttgtgaatgtgctggctgtgtgctccatgccgtttgcagtccacctcatagacttc
acgaagaacaaccggcccattgccagttatgaacctgagctccatcctgctgctatgtac
agaatcaaaactctaaaggctacagtgcaggtgttttcaactggcagcctcacagttaca
ggaccaaacgtgcagaacgtggcggcggcagtggagcacatctaccctctcctgttcgag
tgtcagaaaccgaagccgctctgcaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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