KEGG   Kryptolebias marmoratus (mangrove rivulus): 108248920
Entry
108248920         CDS       T05608                                 
Name
(RefSeq) transcription factor SOX-13 isoform X1
  KO
K09269  transcription factor SOX5/6/13 (SOX group D)
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:kmr03000]
    108248920
Transcription factors [BR:kmr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    108248920
SSDB
Motif
Pfam: HMG_box HMG_box_2
Other DBs
NCBI-GeneID: 108248920
NCBI-ProteinID: XP_017293463
Position
LG4:complement(27968200..28036860)
AA seq 655 aa
MTCVSRTVPVREHFWISAHPLSPVRMVEPSPPALHLLSSAGDVGMADVGVKVEQEECSGT
STSPEPPKRSPLHDWSGSQPLEARQLTPPLSCSPSEGSPGKELPHRQSLMGVKEARAQER
SEGQSNFKEVMPTIEKLLNADWKEKLLDKSTVGAGQLKGTPESLAEKELQLLMMINQLSG
LREQLLGAHSEQRNMAALLLEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQ
VNMPYVMIPAFHPNTQPLSVTSDPPMTLPLQPIPCKPTVDYPMQLLPNTHPTPVKRSSGS
FRQEASQPLNLTSKPKGLELRKTSSPQGLELGSLGLQGAYRSRDLQRDVSHSPPRSALSF
LGDGDVVTQAIHDAQQLLRSHSSGGRDRERDSGGKMEYKSSLCGERISHCERGEERHGLP
STEDHLSSDSEGALPVSVPGSYADTRPTSSSGHIKRPMNAFMVWAKDERRRILQAFPDMH
NSSISKILGSKWKAMSNQEKQPYYEEQARLSRQHLERYPDYKYKPRPKRTCIVEGRRLRV
GEYKAMMKSRRQEQRATYTHSQTEPPQIHYSQSDGQYPGSGGSVSVPNMPFHPALLEHYL
PQVPPTTRRAEGQVTPTSQPRDRERERKRARPPYSEGEESDVGERSEGELVLLTD
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgacttgcgtcagcagaaccgttccagttagggagcacttttggatttctgcacatcca
cttagccctgtcagaatggttgagcccagccctccagcactgcacctcctctccagcgcc
ggggatgtcggcatggcagatgttggtgtgaaagtcgaacaggaggaatgtagcggaacc
agtaccagtcctgaaccacccaagaggtctcctttgcatgactggtccggaagtcagccg
ctcgaggctcgccaattgaccccaccactgtcttgctccccttcagagggctctccagga
aaagagctgcctcacaggcaaagcctcatgggagtaaaggaagccagggctcaagagcga
tcagaaggacaatctaacttcaaagaagtaatgccaaccattgagaagctgttgaatgct
gactggaaggagaaacttctggataaaagcacagtaggagcaggacaactaaaaggtacc
cctgagtctctggcagagaaggagctccagttgttgatgatgataaaccagctgagtggg
ctcagagagcagctcctgggggcccactcggagcagaggaacatggccgccctgctgctg
gagaagcagcagcagcagatggagctggcccggcagcaacaggaacagattgccaagcag
cagcagcagctgatccagcagcagcataagatcaacctgcttcagcagcagatccagcag
gtgaacatgccctacgtgatgatcccagctttccacccaaacacccagcccctctctgtc
acctctgaccctccaatgacactgccgctgcagcccatcccctgcaagccaactgtggac
taccccatgcagctgctgccgaacactcaccccaccccagtcaagagaagcagcggttct
ttccggcaggaggccagtcagcccctaaacctgacctctaaaccaaagggtctagagctg
aggaaaacatccagtccacagggcctggagctggggtcgctgggacttcagggggcctac
agatccagagatctccagagggatgtctcccacagcccacctcgctccgccctcagtttc
ctgggagacggcgacgtggtcacccaggccattcatgatgcccagcagctcctgaggagt
cacagcagcggagggagggacagagagagggatagtggggggaaaatggaatataaaagt
tccctatgcggtgaaaggatttctcactgcgagcggggtgaagaaagacatggcctgccg
tccactgaggaccacctcagcagtgactcagagggtgcccttcctgtctctgtcccaggc
agctacgctgacacccggcccacctcctcctccggccacataaagagacctatgaacgcc
ttcatggtgtgggccaaggatgaacgcaggagaattttgcaggccttccccgacatgcac
aactcctctattagcaaaatcctgggctctaagtggaaggcaatgtccaaccaagagaag
cagccgtactatgaagagcaggcaaggttgagcaggcagcatctggagcgctatccagac
tacaaatacaagccccgacctaaacgtacctgcattgtggagggacggaggctgagggtg
ggcgagtacaaagccatgatgaagagccgcagacaagagcagagagcgacctacacacac
agtcaaacagagccaccacagatccattactcacagagtgatggccagtacccaggcagt
ggaggctcagtctctgtcccaaacatgccctttcaccctgcgctgttggagcactatctg
ccacaagtcccgcccaccacacgcagagccgagggccaggtcactcccacctctcagccc
agggacagagagagggaacgaaagagagcacgacccccgtacagcgaaggagaagaaagt
gatgtgggagagaggagcgagggggagctggtcctcctgacagactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   RefSeq(pep) (7)   
DNA sequence (7)   
   RefSeq(nuc) (7)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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