KEGG   Kryptolebias marmoratus (mangrove rivulus): 108248930
Entry
108248930         CDS       T05608                                 
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X2
  KO
K11653  AT-rich interactive domain-containing protein 1
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    108248930 (arid1ab)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:kmr03000]
    108248930 (arid1ab)
   03021 Transcription machinery [BR:kmr03021]
    108248930 (arid1ab)
   03036 Chromosome and associated proteins [BR:kmr03036]
    108248930 (arid1ab)
Transcription factors [BR:kmr03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    108248930 (arid1ab)
Transcription machinery [BR:kmr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     108248930 (arid1ab)
Chromosome and associated proteins [BR:kmr03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    108248930 (arid1ab)
SSDB
Motif
Pfam: BAF250_C ARID
Other DBs
NCBI-GeneID: 108248930
NCBI-ProteinID: XP_017293478
UniProt: A0A3Q3B163
Position
LG5:22053120..22139872
AA seq 2273 aa
MAAQVATLNTSPPSELKKPDLDIQEESVPGEKQHENKETGPDVGSPGQKELQDGSDAGNA
AGGGDPDMKNGTGNLPRVNNNSSNQNDTGGPEGNNLPGMGHHHPGPFPPPPYGYNQHYSR
GPFPQHGGQQSPGMAAASGPGMMDPYPPNSHEHGYHNNYSQFQNRTSYQGQGYGPMNSPR
SSQPPAAGGQPGKQQPAGGTAAMAASYNTQRYNMGNQQPTSTPTLNQLLTSPSSARSYPN
YPQGDYNNQEGASKGPGDMGSSQYGGVHPSWQQRTHHPPPMSPGNTGQPPNRTQPTSPMD
QVGKIRGQPYGGSNPYSQHQQGPPAGPGPQQGGSYPGQGYGPPGPQRYPMGMQNRTPGAI
GGMLYGQQMSAYGQQGPGGYSQQNQGYYGQHGPPTHPGQQQPSYPGQPQGSSGTPYPQQG
HPTQPPGQHGQPGTPYQQSQGPHSSAPSQPPYSQPPQSQPGQPPYVPPQQQQPQQQQQQQ
QQQGPGPQSQQGPQGQPGYPQAPGGGQPPQQQTPQQQQQQGPPQQQQQQSGGPPPQAQQP
PGHGQQSQQSPYSQTPPLQQQQQPPLQQQSPYQRFPPPPQELSQDSFSSQSSAPPSNQPN
KSSQEDSMQGRPSSLPDLSGSIDDLPTGTEAALSPGVSTSGVSSSQGEQSNPAQSPFSPH
TPPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQSDSIIHSSMNQD
RVYMRNPQMPPYGSPGQPGSALSPRQSSGGQMHGGMGPYPQNNMGNYGPQGGQYGPQGYP
RQPGYTGMPNANYPSGPGMGGTMNPMPGQGSGVPYGNIPPGRIGPGQMGARPYGPNMSSN
MGGMPPQVGSGMCPPPVMNRKDGGPSMHHGPSNSIHNRPPGYPNMSQGMMGAGSPYGPGM
NSMHGVMNQGGPGPYPMGANIANSTPGIAPGSDFGMDKMNPAQKINNKVDGTPKPESKKK
SSSSTITNEKITRLYELGPEPERKMWVDRYLAFAEEKAMGMNNLPAVGRKPLDLFRLYVS
VKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDF
FNTDTKKNQTKIQPPSPAGSGSLQGPQTPQSTTSSMAEGGDLKPPTPASTPHSQIPPMPS
VRSSVNLQDPFADGGDPAFSRRNAMTPNSQGYQPGMGSSEMMGRMGPYEPNKDPFGGMRK
AGEQFMSPGPNSGMGEQYNRGPPGPMGNMPMGQRQQYPYGYERRQEPGMGPEGTMGPGAP
QPNMMPSGADTGMYSPSRPPPQQRHESYTNQYPGQGAPPGGPYPNQQPGMYPQQQPNYKR
PVDGGYGPPAKRHEGEMYNVPFGGQQQPGPQPSGHQGQQDMYNQYNAYPGGDRRPPGPQN
QFPFPFGRDRGPSSAGPNSQSHMPSQMMGSSMPSGPDGPQGPVWQGRNEMGYPNYPNRQG
PTVPGQGPGYHNMNRSEEMMSSDQRMNHEGQWPGHVNQRQPPFGPTASGPPMTRPLPSTY
QTSQNHIPQVSSPAPIPRPMESRTSPSKSPYMHPGIKVQKAGPPVPASHIGQAPVQQPLI
RRDVAFPPSSVEATQPHLKPRKRLTMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILL
YDDNSISTFNLCQLPGFLELIVEYFRCCLIEIFGILKEYEVGDPGQRILIDPNAAEDSDD
DIPIPEGEEMDTDEEDEEDEETEDTKTNHETSSLVQVKKEEEEHSLKDKSSEDEEEEKES
STKEASSSTSGSLQDPKVHLEKPKQASKFDKLPIKVVRKKNPFLANSLSKRGQRQSFNSG
LIHWSVGGGDTTEHIQTHFESQMDLLKQWKCTPATTEGRKKNKASAAATENPEKSKSCGE
DKAQQQQQIQPSEALPTPAEKTPSSLPIGAPVTATIDDVLSARPGSVTEEVVRGGAEEQK
ENGKFLFSINPDLQSRRNIKILEDEPHSKDEMPLSTLSDWQDSLARRCICVSNIVRSLSF
VPGNDLEMSKHPGLLLLLGRLVLLHHRHPERKQAPVTYEKEEEEDEGVSCDSDEWWWDCL
EVLRENCLVTLANISGQLDLSIYPESICLPLLDGLLHWAVCPSAEALDPFPTLGPHSSLS
PQRLVLETLSKLSIQDNNVDLILATPPFSRLEKLYGSLVRLVGERKVAVCREMSVVLLAN
LAQGDSLAARAIAVQKGSVGNLLGFLEDSLAATQYQQSQNSLLQLQGGPQFEPTSADMMR
RAARALHALAKVEENHSEFTLYESRLLDISVSPLMNHLVSQVICDVLFLIGQS
NT seq 6822 nt   +upstreamnt  +downstreamnt
atggccgctcaggtcgccactctcaacaccagcccgccatccgagctcaaaaagccggat
ctggacatacaagaggagtcggtaccgggggagaagcagcatgaaaataaggagacggga
cctgacgtgggatctccgggccagaaggagctgcaagacgggagcgatgctgggaatgct
gcgggaggaggggatcctgacatgaagaacggcactgggaatttacccagggtaaataat
aacagcagcaaccagaatgatacgggtggacctgaggggaataacctccccgggatgggt
caccaccacccgggtccctttcctcctcctccttacggctacaaccagcactacagccgg
ggcccttttcctcaacatggcggacaacaaagccctggcatggcagctgcatcggggccg
ggcatgatggacccttacccccctaactcacacgagcacggctaccacaacaactacagc
cagttccagaacaggacttcttaccagggccaaggatacgggcccatgaattccccgcgg
agcagccagcctccggcggccggggggcagccaggcaagcagcagccagcaggaggaacc
gctgctatggctgcctcatacaacactcagaggtataacatggggaaccaacaacctacg
tctacgccaactttaaaccagcttctgacctcccccagctccgccaggagctacccaaac
tacccccagggagactataataaccaggaaggggccagcaagggaccaggagacatgggc
agcagtcagtatggtggggtccatccgagttggcaacaaaggacccaccatccgcctcct
atgagcccggggaacaccggacagccgcccaacagaacccagcctacgagccctatggat
caggtcgggaagatccgtggccagccgtatggaggatctaacccctactcccagcatcag
caagggcctcccgcagggccaggaccccagcaaggaggctcctacccagggcaaggctac
ggacccccggggcctcagaggtaccccatggggatgcagaaccgcacgcccggtgccatt
ggcggcatgctgtacggacagcagatgtctgcttatggacagcagggtccgggaggctac
agccagcagaaccagggttactatggtcagcatggtcccccaactcaccctggccagcag
cagccttcatatcctggccagccccaaggcagctctggtactccctaccctcagcagggc
caccctactcaacctcctggccaacacgggcagccggggaccccttaccaacagtcccaa
ggtccccacagctctgctccgagccagcctccctacagccagcccccacagtctcagcca
ggacagccaccttatgtacccccccagcagcagcagcctcaacagcagcagcagcagcag
cagcagcagggtcctggtcctcaaagtcaacagggtcctcagggccaacctgggtaccca
caggcacctggaggggggcagccaccacagcagcaaaccccacaacagcagcagcagcaa
ggacccccccagcaacaacagcaacaatcaggaggtccacctccccaagcccagcagccc
cctggtcacggccaacaaagtcaacagtcaccgtactcccagacaccccccctgcagcaa
caacaacaaccaccactgcagcagcagtcaccatatcagagatttcctcctcccccacag
gaactgtcccaggactcgttcagctctcagtccagcgctcctccctccaaccagcccaac
aagagctctcaggaggacagcatgcagggacggccatccagcctgccggatctctctggt
tcaatcgatgacctgcccactggcacagaggccgccttgagtccgggtgtcagcacctcg
ggggtgtccagcagtcagggcgaacagagcaatccagcccagtcacccttctccccacac
accccaccgcacctgccgggcatacgcgggccctcgccatcccccgtgggctccccagca
agtgtcaccccgtccaggacgggcccgctgtcccccgctgcagtgccaggcaaccagatg
cccccccgaccacccagcgtccagtcagacagcatcatacattcttccatgaaccaggac
agggtttacatgcgaaaccctcagatgcctccatacgggtcccctggacagcctggctcc
gccttatctccacgccagtcttcaggaggtcagatgcatggtgggatgggaccatacccc
cagaacaacatgggaaactacggccctcaaggggggcagtatggcccacaaggttatccc
aggcaacccggttacacgggtatgcccaacgctaactaccccagtggcccagggatgggg
ggcacgatgaaccccatgcctggtcagggcagcggggttccatatggaaacattcctcct
gggaggataggccccgggcagatgggtgctcggccctacggtcccaacatgagctccaac
atgggcggcatgcctcctcaggtggggtcaggcatgtgccccccaccagtcatgaacagg
aaggatggtggcccctctatgcaccacggtccctcaaactccatacacaacaggccaccg
ggctaccctaatatgtcccagggtatgatgggagcaggctctccatatggcccaggcatg
aacagcatgcacggtgtgatgaaccaggggggtccagggccttatccaatgggtgccaac
atagccaacagtacccccggaattgctcctggttcagactttggcatggacaaaatgaac
ccggcccagaagatcaacaataaagttgatgggacacctaaacctgaatccaaaaagaag
tcgagctcttccaccatcaccaatgagaagatcacccgactgtatgagcttggccctgag
cctgagaggaagatgtgggtggaccgatacctggccttcgctgaggagaaggccatgggc
atgaacaatcttcccgctgtgggccgcaagcctctcgatctctttagactctatgtgtct
gtcaaagagatcggcggcctcacccaggttaacaagaacaagaagtggagggaactggcc
accaacctgaacgtgggcacatccagcagcgctgccagctcactcaagaaacagtacatc
cagtgtctgtatgcctttgagtgcaagattgagcgcggtgaagacccacccccggacttc
ttcaacacggacacaaaaaagaaccagacaaagatccagccaccaagtccagctggttca
gggtcacttcaaggaccccaaactccccaatctactactagctcaatggccgaaggggga
gacctgaagccccccaccccagcctccaccccacactcacagataccgccgatgcccagt
gtcaggagtagtgttaatctgcaggacccttttgctgatggcggagacccagcattttcc
agaaggaacgccatgactcccaactctcagggctaccagccagggatggggagttcagag
atgatgggtcggatgggtccctacgagccaaacaaggacccctttggaggaatgaggaaa
gctggagaacagttcatgtcacctggtccaaacagtggaatgggggaacagtataacaga
ggaccaccgggcccaatgggcaacatgcctatgggccagagacaacagtacccatatgga
tatgaacgaagacaggaaccaggcatgggtcctgaaggcaccatgggacccggagctcct
cagcccaacatgatgccttctggtgctgacacagggatgtactcacccagccgtcctcca
cctcagcagcggcatgagtcttacacaaatcagtatcctggccaaggagcgccccctggt
ggcccataccctaatcaacagccaggaatgtatccacagcagcagccgaactacaagcgc
cctgtagacggagggtacggtcctccagccaagcgccatgagggagaaatgtataacgtt
ccttttggcggtcagcagcagcctggaccccaaccttctgggcaccaaggccagcaggac
atgtacaaccagtataatgcatatccaggtggagatcggagaccaccaggtccacagaac
cagttcccattcccattcggacgggacagagggccttcatcagcaggtccaaactcccag
tctcacatgccttcccagatgatgggaagttccatgccttcaggtccagacggcccccaa
ggcccagtgtggcagggccgcaacgagatgggctatcccaactatcccaacagacaggga
cctactgtgccaggccagggtcctggataccacaacatgaaccgctcagaggagatgatg
tcttcagaccaacgaatgaaccacgaaggacagtggcctggccatgtcaaccagcggcag
ccaccatttgggcccactgcctctggaccacctatgaccagacccctaccctccacctac
cagacttcccagaaccacattcctcaggtgtcgagcccagctcccataccccggcccatg
gaaagcaggacatcacccagtaaatcaccctacatgcatcctggcattaaggtgcagaaa
gcaggtcctcccgttcccgcctcacatattgggcaggcgcctgtacagcaacccttgatc
cgaagagacgtggccttccctcccagctctgtggaggctacccaaccccaccttaaaccc
cgaaaacggctcaccatgaaagacattggcactcctgaagcttggagagtaatgatgtct
ctaaagtcgggtttattagctgaaagcacctgggccttggacaccattaacattttactg
tatgacgacaacagcatctctacttttaacctttgccagctacctggattcctggagctg
atagtggagtacttcagatgctgcctcatcgaaatctttggcatcttaaaagagtatgaa
gtgggggaccctggccagcgcatcctgatcgaccccaacgctgctgaagactctgatgat
gatattcccattcctgagggtgaagagatggacacagatgaggaggatgaggaagatgag
gagactgaagatacaaagaccaatcatgaaacctcctcactggtgcaggtgaaaaaagaa
gaggaggaacactccctgaaagataagtcctcagaggatgaagaggaggaaaaggagtct
tctaccaaggaagccagtagctctacctcagggtccctgcaggaccccaaagtccacttg
gaaaagcccaaacaggctagtaagtttgataagcttcccatcaaagtggtgcggaagaag
aatccattcctggcaaacagcttgtccaaacgggggcagcgacagagtttcaacagcggc
ctgatacactggagtgttggaggtggtgacactactgagcatatccagacccactttgag
agccagatggatctcctcaagcagtggaaatgcacgccagcaacaactgaaggccgcaag
aagaacaaggcttctgctgcagcaacagagaatcctgagaagtccaagtcctgtggagaa
gacaaggctcaacagcagcaacagatccagccttctgaagccctaccaaccccagcagag
aagaccccttcatctcttcccattggtgcaccagtcactgccaccattgatgatgtatta
tctgcccgcccagggtcagtcacagaggaggtggtccgtggaggcgcggaggagcagaag
gagaacggcaagttcctgttcagcatcaaccctgatctccagagccgccgcaacatcaag
atcttggaagatgagcctcatagcaaagacgaaatgccgctcagcaccctgtcggactgg
caggactcactagctcggcgctgcatctgcgtctccaacattgtgcggagtctgtccttc
gtgcccggcaacgacctggagatgtcaaaacacccaggcctcctgctgctgcttggacgc
ctagtgctgctccaccacaggcacccggaacgcaaacaggcgccggtcacctacgaaaag
gaggaggaggaagacgagggtgtgagctgcgacagcgacgagtggtggtgggactgtctt
gaggtgttgagggagaactgcttggtcactctggccaacatctcaggccagttggacctt
tccatctacccagagagtatatgcctcccactgctggatggcctgctccactgggcggtc
tgcccctcagcagaggccttggaccccttccccacgctcggaccccacagctccctctca
ccccagagactggtccttgagaccctcagtaagctcagcatccaggacaacaatgttgac
ctcattctggcaactccgccattcagccgcttggagaaactctacggctcgctcgtacgc
ctggtcggggaacgcaaggtggccgtctgccgggaaatgtcagtcgtcttattagctaac
ttagctcagggcgacagcctggcagcgcgggcaattgctgtgcagaaaggcagcgtgggt
aacctgctaggcttcttggaggatagcttagcggccacgcagtaccaacagagccaaaac
tccttgctacaactgcaggggggccctcagtttgagcctacaagcgcggacatgatgcgg
cgtgcggctcgggcgctgcatgccctggctaaggtggaggaaaaccactcggagttcact
ttgtacgagtcgcggctactagacatctcagtgtctccactgatgaaccatctggtgtcc
caagtaatctgtgatgtactgtttctgatcggccagtcatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system