KEGG   Kryptolebias marmoratus (mangrove rivulus): 108250131
Entry
108250131         CDS       T05608                                 
Symbol
ambra1b
Name
(RefSeq) activating molecule in BECN1-regulated autophagy protein 1b isoform X1
  KO
K17985  activating molecule in BECN1-regulated autophagy protein 1
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr04137  Mitophagy - animal
kmr04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    108250131 (ambra1b)
   04137 Mitophagy - animal
    108250131 (ambra1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:kmr04131]
    108250131 (ambra1b)
   03029 Mitochondrial biogenesis [BR:kmr03029]
    108250131 (ambra1b)
Membrane trafficking [BR:kmr04131]
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    108250131 (ambra1b)
Mitochondrial biogenesis [BR:kmr03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    108250131 (ambra1b)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40
Other DBs
NCBI-GeneID: 108250131
NCBI-ProteinID: XP_017295350
Position
LG11:26815492..26832355
AA seq 1390 aa
MASRQRNSVRILSSRERGSQTFGSQRLLQLLVEEKVRWMKWQSQKVELPDSPRSTFLLAF
SPDRTLMASTHVNHNIYITEVKTGKCLHSLVGHRRTPWCVTFHPTIPGLVASGCLDGEVR
IWDLHGGSESWFTESNVAIASLAFHPTAQLLLIATNNELHFWDWSRPEPFAVVKTGSDTE
RVRLVRFDPLGHNLLTAIVNPSNQQNEEDSEVPMDSVEMPHFRQRSFLPSQPVRRTPILH
NFLHILSSRAPGTQGGAEQQRPLGENGGSIGETPSMPLAQYPVAERGPPFPGCTQHLGMM
CLCSRCSVSRNPSLAASSGAQPDPPSLSTASTFSSARTEPRQPSERPSAFTSVYYSASSS
LNPIIPSSMEPHSAPRPGPDWTRSLLSMREGGVGPAMLPPRTSSSSSVSLLSVLRQQDGS
SHSPVYTSATEGRGFPQQGDAGTRDAAGTSSGHHPLWDGLRGTSASFRNVLQCNLSRYFL
EIDRIDIDPTLGGSVGEGGQEPSQELLNNNMDPDRPGPSSSSSSTSSPTIIHYQPPLPPP
PASHSLENNVPPPASRGHLNRCRACHNLLTFNHDSQRWERTNQASSTSASAPEQPSSSTS
SSSSPFPPSMPPWQPEDSRRTLETQTQDRRLAPESSEQPPPPPVEGAGTVAFPIALPPSQ
PSEQTVGLVYNQDTAQWERVYRQASTGRTTDPPEALSQEMPVDPPDEDSLRRRLLESSLL
SLSRYDMSGSRDHPIYPDPARLSPAAYYAQRMIQYLSRRDSIRQRSLRYQQNRLRAMSTS
SDSPTSNPSSSMDNSDVDFEELDDNGDRSRHRTPRNARMSAPSLGRFVPRRFLLPEYLPY
AGIFHERGQPGLATHSSVNRVLAGASIGDGQSAVASNIANTTYRLQWWDFTKFDLPEISN
ASVNVLVPNCKIYNDASCDISADGQLLAVFIPSSQRGFPDEGILAIYSLAPHNLGEMLYT
KRFGSLSHLSFPEPDSDPNRVFNDPVSLPPTGPNAISVSLSPMGCYVMVGLASRRILLHP
TTDHMVAQVFRLQQPHGGETSMRMVFSVVYPMAPDQRRHVSINSARWLPDPAMGLAYGTN
KGDLVICRPVFYRSDGESPAEPSSEPLFSVNNSGTSRTRGSDRPGPNRSGWRLDRDMGLM
NAIGLQPRNPAPSVTSQGTQTPIIQLQNAETQTERDLSEPSTSQPPLNVTPETPSTSRAA
QAPQEASESRVQDGETPEASAEPNTSAAGSGPVESAEFGSGEDALARIRRLIAEGGMTAV
VQREQSTTMASMGGFGNNIIVSHRIHRGSQTGPGASRPAADLSSQPLLLAPPIWGPSVLR
GPPPPTLSVTVDMDDVFDGGRTDDDSPPGPSSSSLLLSSPSSSSSSSSSHSPLPGSEGGP
NSYPGDPYSR
NT seq 4173 nt   +upstreamnt  +downstreamnt
atggcgtcccgtcagaggaactcggtgcggatcctgtcgagccgggagcgaggatcccag
acgtttggctctcagaggctcctgcagctgctggtggaggagaaggtccgctggatgaag
tggcagagtcagaaagtggagctgccggacagccctcgctcaacgttcctgctggccttc
agccccgacaggaccctgatggcctccacacacgtcaaccacaacatttacataacggag
gtgaagactggaaagtgcctacattccttagtgggccaccgcagaaccccctggtgcgtg
acctttcaccccaccattcctggcctggtggcctctgggtgccttgatggtgaagtccgg
atctgggacctccatggcggcagtgagagctggtttacagagagcaacgtggccatcgcc
tcgctggccttccacccgaccgctcagctcctcctcatcgccaccaacaacgagctgcac
ttctgggactggagccgaccggaaccgttcgccgtggtgaagacgggcagcgacacggag
agagtgaggttagtgaggtttgaccctctgggtcacaacctgctcacggcgatcgtgaat
ccatccaatcagcagaacgaggaggactcggaggttcccatggacagcgtggagatgcct
cacttccgtcagcgctccttcctgccttcccagccggttcgtcggactcccatccttcat
aacttcctccacatcttatcgtctcgcgccccggggactcaggggggggcggagcagcag
cggcctctcggggaaaacggaggcagtattggggaaactcccagcatgcctctggcccag
taccccgttgctgagcgcgggccgccgttccccggctgcacccagcacctgggcatgatg
tgcctgtgcagccgctgctctgtcagtcggaacccctccctggctgcgtcctcgggggct
cagcccgaccccccgtcgctctccacagcctccaccttctcttcggcgcgtacagagccc
aggcagccctcagagcgtccctccgccttcacctccgtctattacagcgccagctcctcc
ctcaaccccatcatccccagcagcatggagccacactccgcccccagaccgggaccggac
tggacccgcagcctgttgagcatgagggagggtggggtcggtccggccatgctgccaccc
aggacctcctcctcttcctccgtcagcctcctgtcggtgctccgtcagcaggacggctcg
tctcactcccccgtctacacctctgccaccgaggggcggggtttcccccagcagggagac
gcggggacccgagatgccgctggtacgagtagcggccaccacccattatgggatggcttg
cgcggcacctcagcctccttccgtaacgtcctgcagtgcaacctgagccgctacttcctg
gagatcgaccgcatcgacatcgacccgacgctagggggcagcgtgggggagggcggccag
gagccgagccaggagctgctgaacaacaacatggaccctgatagaccgggaccatcttct
tcttcctcctccacttcctccccaaccatcatccactaccagcctcctcttcctcctccc
cccgcctcccacagcctggagaacaacgttcctcccccggcctcccgaggccacctgaac
cgctgccgggcctgccacaacctgctgaccttcaaccatgactcccagcgctgggagcgc
accaaccaggcgtcctccacctccgcctctgctcccgagcagccttcctcctccacctca
tcatcttcctcccccttccctccatctatgcctccctggcagcccgaggacagcaggagg
acgttagaaactcagacccaggacaggaggctggctccggagtccagcgagcagccgcct
ccccctccagtggaaggagcaggaactgtggccttccccatagccctgccccccagccag
cccagcgagcagacggtgggcctagtgtacaaccaagacacggcacagtgggagagagtg
taccggcaggcctccaccggccgaaccaccgatccaccggaggccttaagccaagaaatg
cctgttgaccccccagacgaggactccctgaggaggcggctgctggaatcttctctgttg
tcgttgtctcgatacgacatgtcaggatccagagaccaccccatctaccctgacccggcc
agactttctccagctgcgtactacgctcagaggatgatccagtatctgtcgagacgagac
agcatccgccagcgttctctgcggtaccagcagaaccgcctgcgggccatgtctacttcc
tctgacagcccaaccagcaacccgtccagttccatggacaacagcgatgtggacttcgag
gagctggatgataatggagacagatcgagacaccggacgccacgaaacgccaggatgtct
gcaccctcgctgggtcgcttcgtccctcggcgtttcctcctccctgagtacctgccttac
gctggaatctttcatgaacgagggcagcccggtctggcaacacactcctctgttaacaga
gttctcgctggggcgtccatcggagacggtcagtctgcagtcgccagcaacatcgccaac
accacctaccgcctgcagtggtgggacttcaccaagtttgatctgcctgagatcagcaac
gcttcagtcaacgttctggtgccaaattgtaaaatctacaacgacgccagctgtgacatc
tctgcagacggtcagctgctggccgttttcattcccagcagtcagcggggttttcctgac
gagggcatcctggccatctactctctggctcctcacaacctgggagagatgctctacacc
aagagattcggttcgctttcacacctcagcttcccagaaccggattcagatccaaaccgg
gtttttaatgatcccgtttccctcccccccacaggcccaaacgccatctctgtcagcctg
tctccgatgggctgctacgtgatggtgggtctcgcctcccgcaggatcctgctgcatccc
accaccgaccacatggtggcgcaagtcttccgcctgcagcagccgcacggaggagagacg
tccatgaggatggtcttcagcgtggtgtaccccatggctccggaccagaggcgccacgtc
agcatcaactcggctcgctggctgccggatcccgccatgggtctggcgtatggaaccaac
aagggagacctggtcatctgtcggcccgtgttctatcggagtgatggtgagagtccagca
gaaccgagcagtgaaccgttattttctgtcaacaacagcggaaccagccggacccgaggt
tctgacagaccaggaccaaaccgctccggctggaggctggaccgagacatgggactgatg
aacgccatcgggctccagcccagaaaccccgccccttcagtgacatcacaaggaacccag
acgccgatcatccagctgcagaacgcagagacgcagacggagagggacctatcagagccc
agcacctcgcagccgcctctcaatgtgactcctgaaactccgtctacgagtcgagccgct
caggcgccgcaggaagcgtctgagagcagagttcaggacggagagacgcccgaagcttca
gctgagcccaacacgtcagcagctggttctggtccggtcgagtcggcagagttcggttcc
ggtgaggacgctctggcccgaatccggcggctcatcgccgagggcggcatgacggcggtg
gtgcagcgggagcagagcaccaccatggcgtccatgggcgggttcgggaacaacatcatt
gtcagccaccggatccaccgcggctcgcagaccggccccggggcctccaggccggctgcc
gacctttcctcgcagcccctcctcctggccccgcccatctggggcccctcggtgctgcgg
ggccccccgcctccgaccctctcggtgacggtggacatggacgacgtgttcgacggagga
cggacggatgacgactccccgccgggtccttcatcctcctccctgctgctgtcgtccccc
tcctcctcatcatcttcctcctcctctcacagccccctccccggcagcgaaggggggccg
aacagttaccctggtgacccctacagcaggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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