KEGG   Kryptolebias marmoratus (mangrove rivulus): 108250933
Entry
108250933         CDS       T05608                                 
Symbol
utp4
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog isoform X2
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
kmr  Kryptolebias marmoratus (mangrove rivulus)
Pathway
kmr03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:kmr00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108250933 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:kmr03009]
    108250933 (utp4)
Ribosome biogenesis [BR:kmr03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    108250933 (utp4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Ge1_WD40 PROPPIN Lactonase
Other DBs
NCBI-GeneID: 108250933
NCBI-ProteinID: XP_017296524
UniProt: A0A3Q2ZNT2
Position
LG11:26480687..26493178
AA seq 688 aa
MGEFKVHRVRFFDYMPSAIRAVAFCRRTERLAAARADGSVEIFNFADNYFQEKVIPGRDG
RAVEALCWVGRRLFSAGLDGEITEYDLENLRPRYSLEAYGGPVWTISSNKQGTLLAAGCE
DGTVKMFEILEDRIQFQRNLDRQKGRIVSLSWHPSGAQIAAGMMDMIRIFDTETGHASHR
LLVERGAGASKTQEVVVWSVAFLSDSTIISGDSAGKVQIWDGFTGTLVRTHLVTKWDVLV
LSVSPDESSVIAGTSEGTVTQFQFISSAVEPLPGSDRQWVRTRTFKNHSHDVRALVHTDT
AVVSGGMDTQLVVRPLLDKVEKNTQESALRKITFPHKNLVSCAKKAGLLLFQFPDHLEVW
RLGDSDGNGKPGDILPVKRKPEKLIQLNRKGDDQICCSALSPCGGWLAYSTVCGVRLYRL
QLDNNNICINKVSKVPKELCSAQQLCFSSDSSRFFASSSQSSVVVVGLQQLEWRHLQTLR
PKSGSREPVNLLAPSEDGRWLVTANTDCEIHVFDLQKLKLHCSLPVYASCPTAVSVHPTS
GCLVSVHADRQILEFSLEQKEYTEWSRKLQQQGLHPLWLQRDTPVTAVTFDPRNPAHIIL
HDAFMFCVIDQTLPLPDAKTNLYNQLVLRSLPPAERSRNGHAFKICKSFQNLLSVALLED
RSLVVVERPLQDIAARLPAPVRQKKFAT
NT seq 2067 nt   +upstreamnt  +downstreamnt
atgggggagttcaaagttcaccgcgttcgcttctttgactacatgcccagtgccatccgg
gccgtggcgttctgccgccgcacggagcggctggcggcggcccgagctgacggctcggtg
gagatctttaacttcgctgacaactacttccaggagaaggtgatccccgggcgggacggg
cgggccgtggaggctctgtgttgggtgggtcggcgtctgttcagcgccggattggatgga
gaaatcacggagtacgacctggagaacctgaggccccgatacagcctggaggcctacgga
gggcccgtttggaccatcagcagcaacaagcaggggactctgctggcggctggctgtgag
gacggaaccgtgaagatgtttgagatcctggaggacaggattcagtttcagaggaacctg
gaccgacagaaaggtcggatcgtgtccctgtcctggcatccgtccggagcgcagatcgca
gcagggatgatggacatgatccgaatctttgacacagaaacaggccacgcctcccaccgc
ctgctggtggagcgcggtgcgggagcctccaagacgcaggaagtggtggtttggagcgtc
gccttcctgtccgacagcaccatcatcagcggggattctgcagggaaggtccagatctgg
gacggcttcacaggaactctggtccggactcacctggtcaccaagtgggacgtcctggtt
ctgtccgtctcaccggatgagagcagcgtgatcgccgggacgtctgagggaactgtgacc
cagtttcagttcatctcctccgctgtggagccactgcctggttcggaccggcagtgggtc
agaaccagaacctttaagaaccactcgcatgacgtgagggcgctggtccacaccgacacc
gctgtggtttctggaggaatggacactcagctggtggtgcgacccctgctggacaaagtg
gagaagaacacccaggagtcagcgctccgtaaaatcactttccctcacaaaaatcttgtg
agttgtgccaagaaagcaggactgctgctcttccagtttccagatcatctggaggtatgg
aggcttggagacagcgatggcaacgggaagcccggcgacattctgcctgtgaagaggaaa
cctgagaaactgatccagctgaacaggaagggagacgatcagatctgctgcagtgctctg
tctccatgtggggggtggttggcgtactccaccgtctgcggcgttcgtctctacagactg
cagctggacaacaacaacatctgcatcaacaaggtgtccaaagtgcccaaagagctctgc
tcggcgcagcagctctgcttctcctctgactcctccagattcttcgcctcctccagccag
tcgtctgtcgtcgtcgtcggcctccagcagttggagtggagacaccttcagaccctcaga
cccaagtctggctccagggagccggtcaacctgctggcgcccagcgaggacgggaggtgg
ttggtgacggccaacacagactgtgagatccacgtcttcgacctccagaagctaaagctc
cactgctcgctccccgtctacgcctcctgtcccactgccgtctccgtccaccccacgagc
ggctgcctcgtgtccgttcacgccgaccggcagatcctggagttctccctggagcagaag
gagtacacggagtggagcaggaagctgcagcagcagggccttcaccccctgtggctgcag
agggacacgcccgtcaccgccgtcacctttgaccccagaaacccggcgcacatcattctg
cacgacgccttcatgttctgcgtcatcgaccagactctgccacttcctgatgcaaagacc
aatctgtacaaccagctggtcctcaggagccttcctccggccgagaggagcaggaacggc
cacgccttcaagatctgcaagagcttccagaacctcctgagcgtggcgctgctggaggac
cgctctctggtggtggtggagcgccccctgcaggacatcgcggcccgcctgcctgctcca
gtccggcagaagaaattcgccacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system