KEGG   Kluyveromyces marxianus: KLMA_10451
Entry
KLMA_10451        CDS       T05269                                 
Symbol
RFA1
Name
(RefSeq) replication factor A protein 1
  KO
K07466  replication factor A1
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03030  DNA replication
kmx03420  Nucleotide excision repair
kmx03430  Mismatch repair
kmx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KLMA_10451 (RFA1)
   03420 Nucleotide excision repair
    KLMA_10451 (RFA1)
   03430 Mismatch repair
    KLMA_10451 (RFA1)
   03440 Homologous recombination
    KLMA_10451 (RFA1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:kmx03000]
    KLMA_10451 (RFA1)
   03032 DNA replication proteins [BR:kmx03032]
    KLMA_10451 (RFA1)
   03400 DNA repair and recombination proteins [BR:kmx03400]
    KLMA_10451 (RFA1)
Transcription factors [BR:kmx03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    KLMA_10451 (RFA1)
DNA replication proteins [BR:kmx03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    KLMA_10451 (RFA1)
DNA repair and recombination proteins [BR:kmx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     KLMA_10451 (RFA1)
   MMR (mismatch excision repair)
     KLMA_10451 (RFA1)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     KLMA_10451 (RFA1)
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 tRNA_anti-codon CDC24_OB3 Rep-A_N Flg_new BRCA-2_OB1
Other DBs
NCBI-GeneID: 34714115
NCBI-ProteinID: XP_022673970
Position
1:complement(952682..954547)
AA seq 621 aa
MGVQLLEGDLLDIFRIPERYNNPVGGIYQVVQTKKGETNAKKNLILINDGKYHVKALLRN
KAAETAQQAELERGDVFKVLSAECAVIKEKKKFVLLVDEIEILSRGLDLFNSSTEFVDAY
LAEHMNELVTLTENGATPSEAASATSSMSSKVAPTSTSNIPAPQARAVPQMKPRGGNGNS
SASQSSRPIFAIEQISPYQNNWTIKARVSFKGDLKKWQNNRGEGYILNVNLLDSSGEIRA
TAFNDNAVKFNEILQEGKAYFVSKARVQPAKPQFSNLKHPYELSLERDCVVEECMNEDAN
DVPEMHFNFIKLNDVNNVEKNTAIDVVGILKSVGPHFELAAKSGKKFDRRDVELVDDSGA
CISLGLWGEQAIKFNLPEGSVVALKGVRVTDFNGKSLSMGNTSSLFANPDIQEAYTLKGW
YDANASNTTFKALKTEGGSGDSSKFIAERTTIAKAIESNLGRSEKGDYFSVKAAISFLKV
DNFAYPACLNEGCQKKVILQSDNTWRCEKCDMNHPHPKYRYMLTISIMDQTGQIWLTLFN
DQAEQLLGVSANELTELKESNNQAFVALTQKVQMNEYDFRIRAREDNYNNETRIRYTVSN
LHELKWKAEADFLANELLKAL
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgggtgttcaactattagaaggggatcttttggatatattccgtattccagagagatac
aacaatccagtgggcggtatataccaggtagtgcaaaccaagaagggtgagactaatgcg
aagaaaaatttgatattaattaacgatggaaaataccatgttaaggcgctattaaggaac
aaggcagcggaaacggcgcaacaagcggaacttgaaagaggggatgtgttcaaagttttg
agtgcagaatgtgcagttatcaaggaaaagaagaagtttgtgttgctagttgatgagatc
gagattttgagtcgtgggttagatcttttcaactcgtctactgaatttgtggatgcgtat
ttggctgaacatatgaacgaattggttacattgactgagaatggtgctacgccttctgaa
gcggcatctgctacatcttctatgagttcgaaggttgcacctacgagtacttcgaatatt
ccagcgcctcaggctcgggctgtgccgcagatgaagcctcgtggtggcaacggaaactcg
tcagcttctcaaagctcgagaccgatttttgccatcgaacaaatctctccataccagaac
aactggacaattaaggcgagagtttctttcaagggtgatctaaagaagtggcaaaacaac
aggggtgaaggttacattctaaatgtgaacttactagactcttccggtgagatcagagct
acggcatttaacgataatgcggtgaaattcaacgagattttgcaagagggtaaggcgtac
tttgtttcaaaggccagagtccagcctgccaagccgcagttctcaaacttgaagcatcct
tacgagttgagtttggaaagagactgtgttgtggaggaatgtatgaatgaggacgcaaat
gacgttccagagatgcacttcaactttattaaattgaacgacgtcaataatgtggagaaa
aacactgcaattgatgttgttggtattctgaaatctgtgggcccacacttcgaacttgca
gccaagtccggtaagaaatttgaccgtagggacgttgaattggtcgatgactcaggtgcc
tgtatctctttgggattatggggagaacaagcaattaagttcaacctacctgagggttcg
gtcgtcgcgttgaagggtgttcgtgtaaccgattttaacggtaaatctttgtcaatgggg
aacaccagcagtttgttcgccaaccctgatatccaagaagcttacactttgaagggttgg
tacgacgcaaacgcttccaataccacatttaaggctttgaaaaccgaaggtggtagcgga
gattcctcgaagttcattgccgaacgtactactatcgcaaaggcaattgagtctaatcta
ggtagaagtgagaaaggtgattatttcagcgtaaaagctgcgataagtttcttgaaagtc
gataactttgcctaccctgcttgtttgaacgaggggtgtcagaagaaggttatactacag
agtgacaacacttggagatgtgaaaagtgtgatatgaaccatccacaccctaaatacaga
tacatgctaaccatttcaattatggaccagacgggccaaatttggttgactttgttcaat
gatcaagcggaacaacttcttggtgtatcagcaaacgaactcacagaattgaaagaaagt
aataaccaggcattcgttgctctaacgcaaaaagttcaaatgaacgaatacgacttcagg
atcagagcacgtgaagacaactacaataacgaaactagaataagatacaccgtttctaat
ctacatgaactcaaatggaaggcagaggcagacttcctagcaaatgagctattgaaagct
ctttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

Download RDF
DBGET integrated database retrieval system