KEGG ORTHOLOGY: K16250

ORTHOLOGY: K16250

Entry

K16250                      KO

Symbol

NRPD1

Name

DNA-directed RNA polymerase IV subunit 1 [EC:2.7.7.6]

Pathway

map03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:ko00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery
    K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1
Enzymes [BR:ko01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1
Transcription machinery [BR:ko03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     K16250  NRPD1; DNA-directed RNA polymerase IV subunit 1
RNA polymerases [br01611.html]
RNA polymerases in prokaryotes and eukaryotes
  K16250

Other DBs

GO:

0003899

Genes

ATH:	AT1G63020(NRPD1A)

ALY:

9322507

CRB:

17895349

CSAT:

104703915 104714647 104752966

EUS:	EUTSA_v10023214mg

BRP:	103838307 103847833 117132791

BNA:	106346632 106406243 106411678 106420995

BOE:	106319336 106342859

RSZ:	108823549 108838170 130501668

THJ:

104809424

CPAP:

110817539

CIT:

102607057

CIC:	CICLE_v10018489mg

PVY:

116142907

MINC:

123211451

TCC:

18606443

GRA:	105792169 105801902

GHI:	107904496 107926978 107930048

GAB:	108455119 108470020

HSYR:

120117370 120142994 120198803

DZI:

111289816

EGR:

104441805

GMX:	100796185 100810483

GSJ:	114377283 114424341

PVU:	PHAVU_002G153700g

VRA:

VAR:

VUN:

VUM:

CCAJ:

APRC:

MTR:

TPRA:

CAM:

PSAT:

VVO:

LJA:	Lj0g3v0149989.1(Lj0g3v0149989.1) Lj0g3v0149989.2(Lj0g3v0149989.2)

ADU:

107488162

AIP:

107642972

AHF:	112749545 112800836

LANG:

109331513 109348939 109350136 109350484

PCIN:

129322328

QSA:	O6P43_024240

FVE:

RCN:

PPER:

PMUM:

PAVI:

PDUL:

MDM:

MSYL:

PXB:

ZJU:

MNT:

CSAV:

CSV:

CMO:

BHJ:

MCHA:

CMAX:

CMOS:

CPEP:

RCU:

JCU:

HBR:

MESC:

POP:

PEU:	105118297 105128991

PALZ:

JRE:

CILL:

CAVE:

QSU:	112003836 112035690

QLO:	115969816 115989355

TWL:	119980623 120017106

VVI:

VRI:

SLY:

SPEN:

SOT:

SSTN:

SDUL:

CANN:

LBB:

NTA:	107766126 107794854

NSY:

104243891

NTO:

104089997

NAU:

109212510

INI:	109153272 109188553

ITR:	116001111 116027495

OEU:	111392206 111398178

EGT:

SSPL:

SMIL:

SHIS:

APAN:

HAN:

ECAD:

LSV:

CCAV:

DCR:	108206665 108209566

CSIN:

RVL:

AEW:

BVG:

SOE:

CQI:	110702509 110719510

ATRI:

MOF:

NNU:

MING:

TSS:

PSOM:

OSA:	4336722 4347810

OBR:	102703806 102716212

OGL:	127769783 127784324

BDI:

100842842

ATS:

109751023

TDC:	119327314 119366548

TAES:

123038976 123113199 123180590

TUA:	125550894 125550918

LPER:

LRD:

SBI:

ZMA:

SITA:

SVS:

PVIR:

PHAI:

PDA:

EGU:

MUS:

ZOF:	121992178 121996124

DCT:

PEQ:

AOF:

MSIN:

NCOL:

ATR:

SMO:	SELMODRAFT_413061 SELMODRAFT_441655

PPP:

112294412

» show all

Reference

PMID:19110459

Authors

Ream TS, Haag JR, Wierzbicki AT, Nicora CD, Norbeck AD, Zhu JK, Hagen G, Guilfoyle TJ, Pasa-Tolic L, Pikaard CS

Title

Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II.

Journal

Mol Cell 33:192-203 (2009)
DOI:10.1016/j.molcel.2008.12.015

Sequence

[ath:AT1G63020]

All links

Ontology (5)   
   KEGG BRITE (4)   
   GO (1)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Gene (211)   
   KEGG GENES (189)   
   KEGG MGENES (20)   
   OC (2)   
Literature (1)   
   PubMed (1)   
All databases (220)   

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