KEGG   Kocuria sp. KD4: HBK84_03500
Entry
HBK84_03500       CDS       T06521                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
kod  Kocuria sp. KD4
Pathway
kod03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kod00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    HBK84_03500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kod03021]
    HBK84_03500
   03400 DNA repair and recombination proteins [BR:kod03400]
    HBK84_03500
Enzymes [BR:kod01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     HBK84_03500
Transcription machinery [BR:kod03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     HBK84_03500
DNA repair and recombination proteins [BR:kod03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      HBK84_03500
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5 DUF6327
Other DBs
NCBI-ProteinID: QIR69244
UniProt: A0A6G9V235
Position
754271..755290
AA seq 339 aa
MLIAQRPTLTEEAVAENRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFSTVEGVKEDVTELILNIKKLSLSSEEDEPVTAWLRKQGPGEVTAADISAPAGVEVHN
PDLHIATLNSKGQLEIELTIERGRGYVSASQNKSGDAEVGRIPVDSIYSPVLKVTFRVEA
TRVEQRTDFDKLILDVETKEAISPRDAVASAGTTLVELFGLARELNSAAEGIEIGPSPTD
AAAAADMALPIEDLELSVRSYNCLKREGIHSVGELVGRSEADLMDIRNFGAKSIDEVKEK
LGELGLALKDSPPGYDLAAHAASLEDEDENNNPFDVDLD
NT seq 1020 nt   +upstreamnt  +downstreamnt
gtgctcatcgcacagcgccccaccctcacggaagaggctgtggccgagaaccgttcccgg
ttcgtgatcgaaccgctggaaccgggtttcggttacaccctcggtaactccctgcgccgt
acgctcctgtcctccatccccggggcctccgtgaccagcatccgcatcgacggcgtgctg
cacgagttctccaccgtggagggtgtcaaggaggacgtcaccgagctcatcctcaacatc
aagaagctctccctgtcctccgaggaggacgagcccgtcaccgcgtggctgcgcaagcag
ggcccgggcgaggtcaccgcggcggacatctccgccccggccggtgtcgaggtccacaac
cccgatctgcacatcgcgaccctgaattccaagggccagctcgagatcgagctgaccatt
gagcgcgggcgcggttacgtctcggcgtcacagaacaagtcgggtgacgcggaagtcggt
cggatccccgtggattccatctactcccccgtcctgaaggtgaccttccgcgtggaggcc
acccgcgtggagcagcgcaccgacttcgacaagctcatcctggacgtcgagaccaaggaa
gccatctccccgcgtgacgcggtggcttcggcgggcaccacgctggtcgagctgttcggc
ctggcgcgcgagctgaactcggccgccgagggcatcgagatcgggccttcgcccacggac
gcggcggctgccgcggacatggcgctgcccatcgaggacctcgagctgtccgtgcgttcg
tacaactgcctcaagcgcgagggcatccacagcgtgggtgaactcgtgggccgctccgaa
gcggacctcatggacatccgcaacttcggtgccaagtccatcgacgaggtcaaggagaag
ctcggtgagctcggtctggccctgaaggattcccctccgggttacgacctcgccgcccac
gcggcgtcgctcgaggacgaggacgagaacaacaacccgttcgacgtcgatctcgactga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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