KEGG   Kosmotoga olearia: Kole_2018
Entry
Kole_2018         CDS       T00914                                 
Name
(GenBank) DNA polymerase III, subunits gamma and tau
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
kol  Kosmotoga olearia
Pathway
kol03030  DNA replication
kol03430  Mismatch repair
kol03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kol00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Kole_2018
   03430 Mismatch repair
    Kole_2018
   03440 Homologous recombination
    Kole_2018
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kol03032]
    Kole_2018
   03400 DNA repair and recombination proteins [BR:kol03400]
    Kole_2018
Enzymes [BR:kol01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Kole_2018
DNA replication proteins [BR:kol03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Kole_2018
DNA repair and recombination proteins [BR:kol03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Kole_2018
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA RuvB_N AAA_22 AAA_19 DNA_pol3_delta AAA_5 AAA_18 AAA_30 AAA_14 Mg_chelatase AAA_7 DNA_pol3_gamma3 ResIII Rep_fac_C Rad17 AAA_24 dnstrm_HI1420 DEAD AAA_assoc_2 AAA_28 SKI nSTAND3 RNA_helicase AAA_6 SRP54 Glyco_tranf_2_5 AAA_16
Other DBs
NCBI-ProteinID: ACR80696
UniProt: C5CHM0
Position
2148272..2149783
AA seq 503 aa
MIFMAEVLYRKYRPKKFEEIVGQDQVKIVLKKAIENQSIAHAYIFFGPRGTGKTTTARIL
AKALNCLSHDDKPCGKCESCIAVDNNSHMDVIEIDAASYRGIDEIRKIRDAASYRPTMGH
YKVYIVDEFHMLTREAFNALLKTLEEPPEHIVFILATTNLEKVPETILSRCQVFTFKPLS
EGQIVEYLQRILKEEKKTYTVEALKIIAKAAKGGMRDAVNLLERALVFGEKIEEDNVKNI
LGILPEEYLKSYLVAILNGDSDEIIALSENIERLGYSHDSVIRQSIELTKDMISRRELEF
ERGVKLIEKLWEVNREMRYSENKKLTFEVLSLTTLAAMNVPSVSVEPAKAVNAVVKEEVK
KSNEEKEVEPITTDIDVSKKSEKVDSKFKEFFETIYEEGHVLIWVLLNLATIKEEDDVFA
LSFALNDLFARELAKEHIETISELMKMRLGKPAKINDNDIVESSDILKKLNPDEKAYVKR
ILTLFEGLDAKDVKIEIEEEGNG
NT seq 1512 nt   +upstreamnt  +downstreamnt
gtgatttttatggctgaagttctttatagaaaatacagaccgaaaaagttcgaagaaata
gttggtcaggatcaagtaaagattgtactaaaaaaagcgattgagaatcagagtatcgct
catgcttatatcttttttggtccgaggggtacagggaaaacaaccactgcgagaatcctt
gcgaaggctctcaactgtctttcacatgacgataaaccttgtggaaaatgtgaatcctgc
attgctgtagacaataattcccacatggacgttatcgagatcgatgcggcttcgtataga
ggtatcgatgaaattcgaaagatcagggacgcagcgtcttatagacccaccatgggacat
tacaaagtttacatcgtggatgaatttcacatgcttacaagggaagctttcaatgccctg
ctcaagactctggaagaaccgccagaacacattgtgtttatcttggctacgacaaatctt
gagaaggttcccgaaacgattctttcaaggtgtcaggtgtttactttcaaacctctttca
gagggtcagatagtagaatatcttcagaggatcctgaaagaagaaaagaaaacatatact
gttgaagcgctcaaaatcatcgcgaaagcggcaaaaggtggtatgcgagacgctgttaat
cttttggaacgtgctcttgtgtttggcgagaagatagaagaagataatgttaaaaacatt
ctgggaattctacctgaagaatatctcaaaagttatcttgtcgcaattcttaatggagat
agtgatgaaatcattgcgttgtctgagaatattgagcgtcttggatattctcatgactcg
gtaattcggcaatctatcgagcttacaaaagatatgattagcaggcgcgaacttgaattt
gaacgcggtgtgaaactcatagaaaagctatgggaagtaaatagagaaatgagatattca
gaaaacaaaaaactcacttttgaggttcttagtttaaccaccctggccgctatgaatgtc
ccctcagtttctgttgaacccgctaaagcagtgaatgcggttgtaaaagaagaggttaag
aaaagtaatgaagaaaaagaggtggagcccattacgactgacatagatgtttcgaagaaa
tctgaaaaagtcgatagtaaattcaaagaattttttgaaactatctatgaagaaggacat
gtgctgatctgggttctcttgaaccttgccacaattaaagaggaagatgatgtctttgct
ttatcttttgctctcaacgatctttttgcccgggaactggcaaaagaacatattgaaacg
atttccgaattgatgaagatgcgactgggaaaaccagcgaagataaacgacaatgatatt
gtagaatcgagtgacatattgaaaaaactgaatccagatgaaaaggcgtacgtgaaaaga
attctgacactctttgagggtcttgatgcaaaggatgtaaaaattgaaatagaggaggag
ggtaatggctaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (49)   

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