KEGG T02471: CONE

Candidatus Kinetoplastibacterium oncopeltii: CONE_0135

Entry

CONE_0135         CDS       T02471

Name

(GenBank) excinuclease ABC subunit A uvrA

K03701

excinuclease ABC subunit A

Organism

kon Candidatus Kinetoplastibacterium oncopeltii

Pathway

kon03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:kon00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    CONE_0135
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kon03400]
    CONE_0135
DNA repair and recombination proteins [BR:kon03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     CONE_0135
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      CONE_0135

SSDB

Motif

Pfam:

UvrA_inter ABC_tran SMC_N AAA_29 RsgA_GTPase AAA_16 nSTAND1 AAA_14 NACHT cobW Viral_helicase1 NTPase_1 SLFN-g3_helicase PrgU AAA_23 DnaJ_CXXCXGXG

Other DBs

NCBI-ProteinID:

AGF48670

UniProt:

M1M9P3

Position

759798..762584

AA seq 928 aa
MSYIHIQGARTNNLKNINIDIPHYKLVVVTGVSGSGKSSLVFDTIYSESQRKYIENMPTS
FRQFVHMLKQPDVDLIEGLSPAIAIKQKTNYKNTRNTVGTVTEINDYIRLLFAKIGVPFC
PEHNQPLIVKTISQITDWTMSLPINSDILILSPVTKNDYASLETICKNLLSQGFLRLYID
NQLMEIEEAITNKKLACTSKIYVVIDRLKIKENNKDRLSSSFEIATKLGIGHVLIKNLSD
GKDKIFSTVHSCPICNYFINILEPSLFNFNSSKGYCKKCKGIGIEYYFDKSIVENNNLSE
ILEIFCLKTGINIDEFHEIYGLNNEKLFDSININKKDLVLSRIKESCGLKRNINISSEEI
ITFLENLFRESKSSYLKSLLNKCLKIRPCLECNGAKLCLEARHVILYNNNESNKKDSGLS
ITEIESMSIDDCLLFFKKLEKQENLISHPILKRILPRLSFLIKMGLGYLSLGRSINTISG
GEAQRIKLSSQICSGLIGITYILDEPSQGLHKHDTKILIEALKNLRDLGNSIIIIEHDKE
IISSADWIIDMGPEGGKNGGFVTAQGTPKQIIDNHNSLTGFYLNNNDYKKVSNKCVNNKT
KWLIIEKAKFNNLKYIDVHIPIGYLTCITGVSGSGKSTLVNDIIQYGVTNNLSGYKEFSD
RYEALRGAEFFDYIIKIDQNSINSNGTTNSNIATYCGIFTTIRELFSKTIESKIRGYTLN
RFSFNMKGGRCELCKGAGISKVEMHFMPDVYVVCEECKGSKYNRETLEIYYGGLNISDVL
NLTIGEAKTFFKNIPRITNKIDMLIKLGLSYLSLGHNINSLSGGESQRVQISIELSKQTQ
GRTLYILDEPTIGLHDHDIKFLLNIIRNLIACNNTVIVVEHNIDIIKTADWVIDIGPGGG
VNGGSVVAQGTIETISSSKDSYTGVYLS

NT seq 2787 nt +upstreamnt +downstreamnt
atgagttatattcatatacaaggtgcacgtactaataatttaaaaaatataaacattgac
attcctcactataaattagtagttgtcactggagtatcaggatctggaaaatcttcacta
gtatttgatactatatattcagaaagtcaaagaaaatacatagagaacatgccaactagt
tttagacaatttgtccatatgctaaaacagcctgatgttgatttaatagaaggattatca
ccagccattgcaatcaaacaaaaaacaaactacaagaacacaagaaatactgttggtaca
gtaacagaaataaatgattacataagattattatttgcaaaaattggtgtacctttttgt
ccggaacataatcaaccattgatagtcaaaactattagccaaataactgattggacaatg
tccttacctataaacagtgatatattgatattatcccctgtcacaaaaaatgactatgca
tcactggaaacaatatgtaaaaacttattgtcacaaggattcttaagattatatatagat
aatcaattaatggaaatagaagaagctataactaataaaaaattagcttgtactagcaag
atatatgtggttatagaccgactaaaaattaaagaaaacaataaagatcgcttatcatct
agtttcgaaatagcaactaagttaggcataggtcatgtattaataaagaatttaagtgat
gggaaagataaaattttctcaacagttcattcatgcccaatttgcaattattttataaat
atacttgagccaagtttgtttaattttaatagcagtaaaggatattgtaaaaaatgcaag
ggtataggtatcgaatattacttcgacaaatctattgtcgaaaataataatttatcagaa
atattagaaatattttgcttaaaaactggcattaatattgatgaatttcatgaaatatat
gggttgaataatgaaaaattatttgactctattaatataaataaaaaagatctagttcta
agtcgaataaaagaatcttgtggattaaaaagaaacataaatatttcatcagaagagata
attacttttctagagaatttatttagagaaagcaaatcaagttatttgaagtcgttatta
aataaatgtctaaaaataaggccatgtttagaatgcaacggtgctaaattgtgcttagaa
gctcgacatgtcatattatataataataatgaatcaaacaaaaaagatagtggtctttca
ataactgaaattgaatcaatgtctatagatgattgtttgctattttttaaaaagctagaa
aaacaagaaaacctcatatctcatccgatattaaagcgtatactccctcgcttatctttt
ttgataaaaatgggattaggatatttatcattaggaagaagtataaatacaatttctggt
ggagaggcacagagaatcaaactctctagtcaaatatgctcaggtttaatcggtataact
tacatacttgatgaaccatcacaaggactacataaacatgatacaaaaatacttatagaa
gcattaaaaaacctaagagatttaggtaacagtataatcattatagagcacgataaagaa
attatatcatcagcagactggattatagatatgggtccggagggaggtaaaaatggtgga
tttgtaacagcccaaggaacaccaaaacaaataatcgataaccataactcattaactgga
ttctatttaaacaacaatgattacaaaaaagtttctaataaatgtgtaaacaataaaact
aaatggctaataatagaaaaagcaaaattcaataacttaaaatacatagatgtacatata
ccaataggatatctaacttgtattactggggtatctggatccggaaaatcaactctagta
aacgacataattcaatatggagtaacaaataacttatctggttataaagaattttctgat
agatatgaagcacttcgtggagctgagttttttgattatataataaaaatagatcagaat
agcattaatagtaatggtacaactaatagtaatattgcaacatattgcgggatctttact
acaattagagagcttttttctaaaaccatagaatctaaaataagaggatacactctaaat
agatttagcttcaatatgaaaggcggtagatgcgaattatgtaaaggagcaggcattagt
aaagtagaaatgcattttatgcctgacgtatacgtagtctgtgaagaatgcaaaggtagt
aaatataacagagaaactctggagatatactacggtggactaaatattagcgatgttcta
aatctaacaataggagaagcaaagactttctttaaaaatatacctagaataactaataag
atagatatgctaattaaacttggtttatcatatttatcactaggccataatattaattca
ctatctggtggagaatctcaacgagttcaaatttccatagaattatcaaaacaaacacaa
ggaagaacactatatattttagatgagccaactattggactacatgatcatgatattaaa
tttttgttaaatataataagaaacttaatagcttgtaacaatactgttatagtggtagaa
cataatatagatataatcaagactgcagactgggttatagacattggccctggaggagga
gtaaatggaggatcagttgtagcacaagggactatagagactatatctagctctaaagat
agctataccggagtgtatttatcataa

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (24)   

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