KEGG   Kosakonia sp. CCTCC M2018092: EH164_21560
Entry
EH164_21560       CDS       T05734                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kot  Kosakonia sp. CCTCC M2018092
Pathway
kot03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kot00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EH164_21560 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kot03021]
    EH164_21560 (rho)
   03019 Messenger RNA biogenesis [BR:kot03019]
    EH164_21560 (rho)
Transcription machinery [BR:kot03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     EH164_21560 (rho)
Messenger RNA biogenesis [BR:kot03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     EH164_21560 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 AAA_25 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AZI89467
Position
complement(4579663..4580922)
AA seq 419 aa
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDEFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaatacgccggtttctgagcttatcactctcggcgaaaat
atggggctggaaaacctggcccgtatgcgcaaacaggacatcattttcgccatcctgaag
cagcacgcaaagagtggcgaagatatcttcggcgacggtgtgctggagattctgcaggat
ggatttggtttcctccgttccgcagacagctcctaccttgccggccccgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcaccggtgacaccatttcaggtaag
attcgcccacctaaagaaggtgaacgttactttgcactgctgaaagttaacgaggtgaac
tacgataaaccggaaaatgcgcgcaataagattctgttcgagaacttaacgccgctgcac
gcgaactctcgtctgcgtatggaacgtggtaacggctctactgaagatttaactgcccgc
gttctcgatctggcttcgccgatcggtcgtggtcagcgtggtctgattgtggcaccgccg
aaagccggtaaaaccatgctgctgcagaatatcgcgcagagcatcgcttacaaccatcct
gactgcgtgctgatggtgctgctgattgatgaacgtccggaagaagtgacggaaatgcag
cgcctggtgaaaggtgaagtggttgcgtcaaccttcgacgaaccggcctcccgccatgtg
caggttgctgaaatggttatcgaaaaagcgaaacgtctggttgagcataagaaagatgtc
attatccttctcgactccatcacccgtctggcgcgtgcttataacaccgttgttccggct
tccggtaaagtgttgaccggtggtgtggatgcgaacgccctgcaccgtccgaagcgtttc
ttcggtgctgcgcgtaacgtggaagagggcggtagcctgaccattatcgcgacggcgctg
atcgataccggttcgaagatggatgaagtgatttacgaagagtttaaaggcaccggtaac
atggagctgcacctctcacgtaaaatcgcagaaaaacgcgtcttcccggcgattgattac
aaccgctccggtacccgtaaagaagagctgctcaccacacaggaagagctgcagaaaatg
tggatcctgcgcaaaatcattcacccgatgggtgagatcgatgcgatggagttcctcatc
aacaagctggctatgacgaagacgaatgatgagttcttcgacatgatgaagcgctcttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

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