KEGG   Klebsiella michiganensis KCTC 1686: KOX_08845
Entry
KOX_08845         CDS       T01681                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
kox  Klebsiella michiganensis KCTC 1686
Pathway
kox02024  Quorum sensing
kox03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kox00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KOX_08845 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KOX_08845 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kox03019]
    KOX_08845 (hfq)
   03036 Chromosome and associated proteins [BR:kox03036]
    KOX_08845 (hfq)
Messenger RNA biogenesis [BR:kox03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     KOX_08845 (hfq)
Chromosome and associated proteins [BR:kox03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    KOX_08845 (hfq)
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: AEX03495
UniProt: A0A0H3HAY2
Position
1882537..1882845
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGTNNYHHGGGAQGSSAPQQDSEDAE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagatccgttcctgaacgctttgcgtcgggaacgtgtt
ccggtttctatttatttggtgaatggtattaagctgcaagggcaaattgagtctttcgat
cagttcgtgatcctgttgaaaaacacggtcagccagatggtctataagcacgcaatttct
actgttgtcccgtctcgcccggtgtcacaccacagcaacaatgctggcggcggtacaaac
aactatcaccacggtggtggtgcgcagggttcttctgcgccgcagcaagacagcgaagac
gccgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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