KEGG   Klebsiella variicola 342: KPK_3620
Entry
KPK_3620          CDS       T00772                                 
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
  KO
K05788  integration host factor subunit beta
Organism
kpe  Klebsiella variicola 342
Brite
KEGG Orthology (KO) [BR:kpe00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpe03032]
    KPK_3620 (ihfB)
   03036 Chromosome and associated proteins [BR:kpe03036]
    KPK_3620 (ihfB)
   03400 DNA repair and recombination proteins [BR:kpe03400]
    KPK_3620 (ihfB)
DNA replication proteins [BR:kpe03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    KPK_3620 (ihfB)
Chromosome and associated proteins [BR:kpe03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    KPK_3620 (ihfB)
DNA repair and recombination proteins [BR:kpe03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      KPK_3620 (ihfB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-DNA_bdg PSK_trans_fac MDMPI_C
Other DBs
NCBI-ProteinID: ACI06745
UniProt: B5XY84
Position
complement(3652997..3653284)
AA seq 95 aa
MTKSELIERLASQQSHIPAKAVEDAVKEMLEHMASTLAQGERIEIRGFGSFSLHYRAPRT
GRNPKTGDKVELEGKYVPHFKPGKELRDRANIYEE
NT seq 288 nt   +upstreamnt  +downstreamnt
atgaccaagtcagaattgattgaaagacttgccagccagcaatctcacattccggcgaaa
gcggtggaagatgctgttaaagaaatgctggaacatatggcctcaacgcttgctcaaggt
gagcgcattgaaatccgcggtttcggcagcttctctctgcactatcgagcacctcgcacc
ggacgtaacccgaaaactggtgataaagtcgaactggaaggtaagtacgttccgcacttt
aagcccgggaaagaattacgtgaccgcgccaatatttatgaagagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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