KEGG   Kosmotoga pacifica: IX53_05200
Entry
IX53_05200        CDS       T03949                                 
Name
(GenBank) hypothetical protein
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
kpf  Kosmotoga pacifica
Brite
KEGG Orthology (KO) [BR:kpf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpf03019]
    IX53_05200
   03009 Ribosome biogenesis [BR:kpf03009]
    IX53_05200
   03036 Chromosome and associated proteins [BR:kpf03036]
    IX53_05200
Enzymes [BR:kpf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     IX53_05200
Messenger RNA biogenesis [BR:kpf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     IX53_05200
Ribosome biogenesis [BR:kpf03009]
 Eukaryotic type
  90S particles
   RNase
    IX53_05200
 Prokaryotic type
  rRNA processing factors
   IX53_05200
Chromosome and associated proteins [BR:kpf03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     IX53_05200
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm DUF3126
Other DBs
NCBI-ProteinID: AKI97312
UniProt: A0A0G2Z6X5
Position
1107665..1108384
AA seq 239 aa
MNEAINERVEKFIRILEIDSIDSELLMRALCHSSFANENPELQLESNERLEFLGDAVLDL
ALADILFTEYSLNEGKMSKIRSAVASEIILSVAARELQLGEYLLLGKGEENSGGRTKDSL
LADAFEAVTAAIYLSGGLERARKFVKRMLKKYIDKALSGELVMDYKTTLQEYTQRTFGTR
PVYISRKNQQKDDFLVEVFLNGEYMGFGIGKTKKRAEQQAAKTVYERLVKGEKGEDENA
NT seq 720 nt   +upstreamnt  +downstreamnt
atgaacgaagcgataaatgaaagagtagaaaagtttattagaatacttgaaatagacagc
atagattcggagctccttatgagggctttatgtcattcttcatttgcaaacgaaaatcca
gaattgcaattggaatcaaatgaaaggctcgaatttctcggagacgctgttctcgatctt
gcccttgctgacattctcttcacggaatattccctgaatgagggaaaaatgtcgaaaata
cgttccgcagtcgccagcgaaattatactttccgtggcggcccgcgaactccaactggga
gaatatctattacttggaaaaggcgaagaaaattccggaggcagaacaaaggactcctta
ctcgccgatgcttttgaagccgtaactgcggcaatatatctgtccggtggacttgaaaga
gcgagaaagtttgtgaagaggatgctcaaaaaatatatagacaaagccttgagtggtgaa
cttgtgatggattataaaactacacttcaggagtacactcagcgaacctttggaactaga
ccggtctacatctcgaggaaaaaccagcaaaaagatgactttctggttgaggtgttttta
aacggcgaatatatgggctttggtattggaaaaactaaaaagcgtgccgaacaacaagca
gcaaaaactgtctatgaaaggcttgtaaaaggggaaaaaggagaagatgaaaatgcctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (15)   

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