KEGG   Klebsiella pneumoniae JM45: N559_3205
Entry
N559_3205         CDS       T02799                                 
Name
(GenBank) ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
kpj  Klebsiella pneumoniae JM45
Pathway
kpj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    N559_3205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpj03019]
    N559_3205
   03009 Ribosome biogenesis [BR:kpj03009]
    N559_3205
Enzymes [BR:kpj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     N559_3205
Messenger RNA biogenesis [BR:kpj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     N559_3205
Ribosome biogenesis [BR:kpj03009]
 Prokaryotic type
  rRNA processing factors
   N559_3205
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio PNPase_C S1
Other DBs
NCBI-ProteinID: AGT24865
Position
3248899..3252132
AA seq 1077 aa
MKRMLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDY
GAERHGFLPLKEIAREYFPANYNAHGRPNIKDVLREGQEVIVQIDKEERGNKGAALTTFI
SLAGSYLVLMPNNPRAGGISRRIEGDDRTELKEALASLELPDGMGLIVRTAGVGKSAEAL
QWDLSFRLKHWEAIQKAAESRPAPFLIHQESNVIVRAFRDYLRQDIGEILIDNPKVLELA
RQHIAALGRPDFSSKIKLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDSTEALT
AIDINSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQRAVE
NRLREAVRQDRARIQISHISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLS
LSILRLIEEEALKENTKEVHAIVPVPIASYLLNEKRAAVSAIESRQGDVRVIIVPNDEMQ
TPHYSVLRVRKGEETSTLSYLLPKLHEEEMALPGDDEPAERKRPEQPALAAFVMPDAPPA
PMLEEPAAAPVAAAAPVAAAAPAQPGLLSRFFSALKNIFSGAEEAKPAEVQIEKKAEEKP
ERQQERRKPRANNRRDRNDRRDNRDNRDNRDNRDNRDTRADNAEGREPRESREENRRNRR
EKPSQNVEARDVRQTSGDDAEKAKSRDEQQPRRERTRRRNDDKRQAQQEAKAQTREEPVV
QETEQEERVQTLPRRKPRQLAQKVRVESAVVEPVAEIVPEAVVAEVIAPHSEPVKAELPA
GVESVADQDENGESREANGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSPMPLTVACAS
PEMASGKVWIRYPVVRPQDQQPEEVQVQDASVAKTVEAVAAPVAVVETVTAAPVTVEPAT
MEPVTAEPVVVEPVAAAEPLVVDAAEVVAPAAVEPAPQEPVTEAPAVEAPQAIAPVTLDP
EPVVVEPEALETTPVVAAPVETIAPVAETVEQAPVIEAAPAEPVKAEPPVSKPVVVAGHR
HATAPMTRAPAPDYVPEAPRHSTWVRPPFAFEGKGAAGGHSATHKATAEPTRPQPVE
NT seq 3234 nt   +upstreamnt  +downstreamnt
atgaaaagaatgttaatcaacgcaactcagcaggaagagttgcgcgtcgcccttgttgat
gggcagcgcctgtacgacctggatatcgaaagccccgggcacgaacagaaaaaagcgaac
atctacaaaggcaaaatcacccgcattgaacccagccttgaagccgcgtttgttgattac
ggcgccgagcgtcatggtttcctccccctcaaagaaatcgcccgcgaatacttccccgcc
aactacaatgcgcatggtcgtcctaatatcaaagacgtactgcgggaaggtcaggaagtt
atcgtgcagattgataaagaagaacgcggcaacaaaggcgctgcgctcaccacctttatc
agcctggcgggcagctatctggtactgatgccgaacaacccgcgcgccgggggaatttcc
cgccgtatcgagggcgacgaccgtaccgaactgaaagaagcgctggcgagcctggagctt
ccggacggcatgggcctgatcgttcgcaccgctggcgtcggcaaatccgccgaagccctg
cagtgggacctgagcttccgcctgaagcactgggaagcgattcagaaagccgcggaaagc
cgtccggcgccgttcctgatccaccaggaaagcaacgtcattgtccgcgccttccgtgac
tacctgcgccaggacatcggcgaaatcctgatcgataacccgaaagtgcttgagctggcg
cgccagcatatcgccgcgctgggtcgtccggatttcagcagcaaaatcaaactgtacacc
ggtgaaatcccgctgttcagccattatcagatcgaatcgcaaattgagtccgccttccag
cgcgaagtgcgcctgccttccggcgggtctatcgttatcgatagcaccgaagcgctgacc
gcgatcgatatcaactccgcccgcgccacccgcggcggcgatatcgaagagacagccttc
aataccaacctcgaagcggctgacgaaattgcccgccagctgcgtctgcgcgacctcggc
ggcctgatcgttatcgacttcatcgatatgaccccggttcgccaccagcgcgccgtggag
aatcgtctgcgcgaagccgtccgtcaggaccgggcgcgcattcagatcagccatatttcg
cgcttcggcctgctggagatgtcccgtcagcgcctgagcccgtcgctgggcgagtccagt
caccacgtctgcccgcgctgctccggcaccggcaccgtgcgtgataacgaatcgctgtcg
ctctctattctgcgtctgatcgaagaagaagcgctgaaagagaataccaaagaagtccac
gccattgttccggtaccgatcgcctcctatctgctgaacgaaaaacgtgccgcagtgagc
gctatcgaatcccgtcagggcgatgtgcgcgttattatcgtgccaaacgacgaaatgcaa
acgccgcactactccgtcctgcgcgtgcgcaaaggtgaagaaacctcaacgctgagctat
ctgctgccgaagctgcatgaagaagagatggcgctgccaggcgacgatgagccggcggag
cggaaacgtccggaacagccggccctggccgcttttgtcatgccagatgcgccgccagcc
ccgatgctcgaagagcctgccgccgcgcctgtcgccgcagcggcaccggtcgcggccgcc
gcaccggcgcagcctggcctgctctcacgcttcttcagcgcgctgaagaatatcttctct
ggcgccgaagaggccaaaccggctgaagttcagatcgagaagaaagcggaagaaaaaccg
gagcgtcagcaggagcgtcgtaaaccgcgcgccaacaaccgccgcgaccgcaacgaccgc
cgtgataaccgcgacaatcgtgacaaccgcgataaccgtgacaatcgcgacacccgtgcg
gacaatgccgagggccgtgaaccgcgcgaatcgcgtgaagagaatcgtcgcaaccgtcgc
gagaagccgtcgcagaacgtggaagcccgtgatgttcgccaaacctcaggcgacgacgcg
gagaaagcgaaatcccgtgacgagcagcagccgcgccgcgaacgcacccgccgccgcaat
gacgacaaacgtcaggcgcagcaggaagccaaagcgcagactcgcgaagagccggttgtg
caggagacggagcaggaagagcgtgtacaaactctgccgcgtcgtaaaccgcgccagctg
gcacagaaagtgcgcgttgagtccgctgtcgtcgagccagttgccgagatcgtgccagaa
gccgtagtggctgaagttatcgctccgcacagcgagccggtgaaagccgagctgccggca
ggggtggagagcgttgcggaccaggacgaaaatggcgaatcccgtgaagcgaacggtatg
ccgcgtcgctcacgtcgctccccgcgtcacctgcgcgtcagcggtcagcgtcgtcgtcgc
tatcgtgacgaacgctatccgacccagtcgcctatgccgctgaccgtagcctgcgcatcg
ccggagatggcttccggtaaagtctggatccgctacccggtggttcgtccgcaggatcag
cagccggaagaggttcaggttcaggacgccagcgtcgcgaaaactgtcgaggccgtagcg
gccccggttgccgtcgttgaaaccgttaccgctgcgccggtcaccgtcgagccggctacc
atggaaccagtaaccgctgagccggtagtcgtcgagccggtagcggccgccgagccgctg
gtcgttgatgctgcggaagttgtcgcgccagcagccgtcgagccagcgcctcaggagccg
gtcaccgaagcaccggctgtcgaagcgcctcaggctatcgcgccagtgacgctcgacccc
gagccggtggtggtagagcctgaagcgctggaaacgacgcctgtcgttgcagcgccagtt
gaaaccatcgccccggtcgcagaaaccgtggagcaagcgccagtgatcgaagcggcccct
gccgaaccggtcaaagccgagcccccggtgagcaagccggtcgtagtggcgggtcatcgc
catgccaccgcgccaatgacccgtgcgccagctccggactatgtcccggaagcaccgcgt
cacagcacctgggtgcgcccgccgttcgcctttgaaggtaaaggcgccgccggtggtcat
agcgcgacccataaagccaccgctgaaccgactcgcccacagcccgtcgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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