KEGG   Kocuria palustris: KPaMU14_06025
Entry
KPaMU14_06025     CDS       T04045                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
kpl  Kocuria palustris
Pathway
kpl03030  DNA replication
kpl03410  Base excision repair
kpl03420  Nucleotide excision repair
kpl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kpl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KPaMU14_06025
   03410 Base excision repair
    KPaMU14_06025
   03420 Nucleotide excision repair
    KPaMU14_06025
   03440 Homologous recombination
    KPaMU14_06025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpl03032]
    KPaMU14_06025
   03400 DNA repair and recombination proteins [BR:kpl03400]
    KPaMU14_06025
Enzymes [BR:kpl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KPaMU14_06025
DNA replication proteins [BR:kpl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KPaMU14_06025
DNA repair and recombination proteins [BR:kpl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     KPaMU14_06025
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KPaMU14_06025
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc
Other DBs
NCBI-ProteinID: ALB03156
Position
1362946..1365852
AA seq 968 aa
MSTKTSTETAAPASVTIGIKTDDPVEIPLPQRIERPERRLLLIDGHSLAFRAFFALSRAA
EYGSGPSFVTSDGTHTEAVYGFLNTMAKMLREQKPTHLVVTFDLDGPTLRSQEYGEYKGG
RDETPEEFHGQVQRIQEILQALNIPIVTKEGYEADDVLATLSAAGSAQEFEVLVFSGDRD
AFQMVDENVTIVYPGRTPSDLRLMDAAAVMEKYKVAPQNYPDLAALTGEQADNLPGVPGV
GPGFAAKWIEAYGRVESIIDNADKITGKKGEALRENLDLVRRNRKLNRLETTLELGFDLA
DAALPAPDAEKVDELFDALEFGSGLRGRLFDALAADDDSPRASAPTIESVEDAESSAGLT
AWLEDAEGEVVVRPIRHDDDARLPGAREITELLLVRAGAEAKSPSALRLDLTASDAQLES
TLAAWLADAEQPKVAVGLKELWKSLTVRGLELAGAVDDIQLSAYLLEPARTHYDLEGLLA
THLDIEVEQFREDDSAAEGQTALDVSAGEPGTAARTSQARLLHEASLALSTLELSRVLRE
KLQADDQLGLLTDMDLPLARILGQMELTGVAVDAQRVAELIDDLDGPIQQAWDTAQEIVS
REEGAAEINLGSTKQLQVVLFETLGLPPTKKIKTGYTTSASAVADLLGKVDPDSEGARFL
LALMRWRDFTKLRQIVQGLRQAVAEDDRIHTDYQQTVAATGRLSSTDPNLQNIPVRSQEG
RRTRAVFVVGQDDQGPFETLVTADYSQIEMRVMAHLSGDEGLIEAFRAGEDLHRYVGSKV
FGVAPEDVTPEMRSKVKAMSYGLVYGLSSYGLSQQLQISVDEARTMMSDYFKRFGGVRDF
LRGVVEEAREVGYTATIDGRRRYLPDLASDNRQARQGAERAALNAPIQGSAADIIKRAMI
NVDAELSREGLRSRVLLQVHDELVVEAASGEVERVTEILREQMGAAAELTVPLEVNVGTG
PDWNAAAH
NT seq 2907 nt   +upstreamnt  +downstreamnt
gtgagcacgaagaccagcaccgagaccgccgcccccgcctccgtcacgatcgggatcaag
acggacgaccccgtcgagatcccgctgccgcagcggatcgagcgcccggagcggcgcctg
ctgctgatcgacggccactcgctggccttccgcgccttcttcgctctgtcgcgggccgcg
gagtacggcagcggtccgtcgttcgtgacctcggacggcacgcacacggaggccgtctac
ggcttcctgaacaccatggccaagatgctgcgcgagcagaagcccacgcatctggtggtg
accttcgacctcgacggccccacgctgcgctcccaggagtacggcgagtacaagggcggc
cgcgatgagacgcccgaggagttccacggacaggtccagcgcatccaggagatcctgcag
gcgctgaacatcccgatcgtgaccaaggagggctacgaggcggacgacgtcctggccacc
ctgtcggccgcgggctccgctcaggagttcgaggtcctggtcttctccggcgatcgcgac
gccttccagatggtcgacgagaacgtcaccatcgtctacccgggacgcacgccgtcggat
ctgcggctcatggacgcggcggcggtcatggagaaatacaaggtggccccgcagaactac
ccggacctggcggctctcaccggagagcaggcggacaacctgcccggcgtccccggcgtg
ggaccgggcttcgcggccaagtggatcgaggcctacggccgcgtcgagtcgatcatcgac
aacgcggacaagatcacgggcaagaagggcgaggcccttcgcgagaacctggacctggtc
cgtcgcaaccggaagctcaatcgcctggagaccacgctcgagctcggcttcgacctggcg
gacgcggcgctgcccgccccggatgccgagaaggtcgacgagctgttcgatgccctcgag
ttcggctcgggcctgcgcgggcgcctcttcgacgccctcgccgccgacgacgactccccc
cgagcctccgcacccacgatcgagtcggtcgaggacgccgaatcctccgcagggctcacg
gcctggctggaggacgccgagggcgaggtcgtcgtgcgccccatccgccacgacgacgac
gcccgcctgccgggtgcgcgcgagatcaccgagctgctgctggtgcgcgcaggcgccgaa
gcgaagtcaccgtccgcactgcgactggatctcacggcctcggacgcgcagctggagtcg
accctggccgcgtggctggccgatgccgagcagcccaaggtggccgtgggcctcaaggag
ctgtggaagtcgttgaccgtccgcgggctcgagctcgccggtgcggtcgatgacatccag
ctctcggcctacctcctggagccggcgcgcacgcactacgacctcgagggcctgctggcc
acccacctggatatcgaggtcgagcagttccgggaggacgactccgccgctgaaggccag
accgcgctcgacgtctccgcgggggagcccggcaccgctgcccgcacctcccaggcgcgg
ctgctgcatgaggcctcgctggccctgtcgaccctggagctctcgcgcgttctgcgcgag
aagctgcaggccgacgaccagctcgggctgctcacggacatggatctcccgctggcccgg
atcctggggcagatggagctcaccggcgtggccgtcgacgcccagcgcgtggcagagctg
atcgacgacctcgacggcccgatccagcaggcgtgggacaccgcgcaggagatcgtgtcc
cgggaggagggcgcggcggagatcaacctgggctccaccaagcagctgcaggtcgtgctc
ttcgagaccctcgggctgcccccgaccaagaagatcaagaccggctacacgacctccgcc
tccgcagtggcagacctgctcggcaaggtcgatcccgattccgagggcgcccgcttcctg
ctcgccctgatgcgctggcgcgatttcaccaagctgcggcagatcgtgcagggcctacgc
caggcggtggccgaggatgaccgcatccacaccgactaccagcagacggtggccgccacc
ggccggctgtcctcgaccgatccgaacctgcagaacatcccggtgcgcagccaggagggg
cgccgcacccgtgcggtgttcgtggtgggccaggacgatcagggcccattcgagaccctg
gtgaccgccgactactcccagatcgagatgcgcgtgatggcgcacctgtccggcgatgag
ggcctgatcgaggccttccgtgcgggtgaggacctccaccggtacgtgggctccaaggtc
ttcggggtcgccccggaggacgtgacgccggagatgcgctccaaggtcaaggccatgagc
tacggactggtctacgggctgagctcctacggcctgtcccagcagctgcagatctcggtg
gacgaggcgcggaccatgatgtccgactacttcaagcgcttcggcggcgtgcgcgacttc
ctgcgcggcgtcgtcgaggaggctcgggaggtcggctacaccgccacgatcgacggtcgc
cgccgctacctcccggatctggccagcgacaaccgccaggcgcgtcagggagccgagcgc
gccgcgctgaacgcccccatccagggttcggccgcggacatcatcaagcgcgccatgatc
aacgtggacgccgagctgtcccgcgagggactgcgctcgcgcgtgctgctgcaggtccac
gacgagctcgtggtcgaggccgcttcgggggaggtggagcgggtcaccgagatcctgcgc
gagcagatgggcgcggccgccgagctgaccgttccgctcgaggtcaacgtgggcaccggc
cccgactggaacgccgcggcgcactga

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