KEGG   Klebsiella pneumoniae subsp. pneumoniae HS11286: KPHS_51610
Entry
KPHS_51610        CDS       T01733                                 
Name
(RefSeq) DNA ligase
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
kpm  Klebsiella pneumoniae subsp. pneumoniae HS11286
Pathway
kpm03030  DNA replication
kpm03410  Base excision repair
kpm03420  Nucleotide excision repair
kpm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kpm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KPHS_51610
   03410 Base excision repair
    KPHS_51610
   03420 Nucleotide excision repair
    KPHS_51610
   03430 Mismatch repair
    KPHS_51610
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpm03032]
    KPHS_51610
   03400 DNA repair and recombination proteins [BR:kpm03400]
    KPHS_51610
Enzymes [BR:kpm01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     KPHS_51610
DNA replication proteins [BR:kpm03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     KPHS_51610
DNA repair and recombination proteins [BR:kpm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     KPHS_51610
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KPHS_51610
   MMR (mismatch excision repair)
    DNA ligase
     KPHS_51610
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      KPHS_51610
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB HHH RNA_ligase DUF3701
Other DBs
NCBI-GeneID: 11850232
NCBI-ProteinID: YP_005229461
UniProt: A0A0H3H4K3
Position
complement(5178881..5180557)
AA seq 558 aa
MRKGGWWLALGMFSASALATCPDWPPARGRQETSRLHQQIVAWKEAYWRQGASGVSDDVY
DQLTLRLAQWRQCFPGATPEDDDLPPPTGDARHPVAHTGVRKLADEDSVARWMKNKSDLW
IQPKVDGVAVTLVYRQGRLVQAISRGDGLRGEAWTARARQIPALEKVMTGELADSVLQGE
LFLRRGGHVQQQAGGMNARAKVAGLMMRADAAAALSQLDVFIWAWPDGPSDMRRRQQLLT
QAGFKYSGQYTHPVSSIEQVAQWRQRWYRSPLPFVSDGVIVREGREPPGRVWSPGKGEWL
AAWKYPPASRVMQVRAIRFSTGRSGRLNVVAELEPQRLDDKRVQRVNVGSVSRWQMLDIG
VGDQLQISLAGQGIPRVDAVVWRTAERHKPTPPPAKFNALTCYFATPECSEQFLSRLIWL
SSKSALNVDGVGENLWRVIQQQNPMTHIFSWLALTVEQLQAVPGISAARGQHLWHQFDLV
RKRPFIRWVLAMGIPVPQGALAQLESENWHLLAAKSEAQWRTLPGVGEIRARQLVAFLHH
PDVVALAQWLSGQRIPGF
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgcgtaaaggagggtggtggctggcgttagggatgttctctgccagcgcgctggcgacg
tgtccggactggccgccggccagaggaaggcaggagacatcacgccttcatcagcaaatt
gtcgcctggaaagaggcttactggcggcagggcgccagcggagtgagcgatgacgtttac
gaccagctcaccctgcgcctggcgcagtggcgacaatgctttccgggcgcgacgcctgag
gatgacgatctgcctccgcccaccggcgatgcgcgtcatccggtggcccataccggcgtg
cgcaagctggcggatgaggacagcgttgcccgctggatgaaaaataaatccgacctgtgg
atacagcctaaagtggacggcgtggcggtgactctcgtttatcgccaggggcgtctggtt
caggccattagccgcggcgatggtctgcgcggtgaggcatggaccgcccgagcccggcag
atcccagcgctggagaaagtgatgaccggtgaactggccgacagcgtactgcagggggag
ctgtttctgcgccggggcggccatgttcagcagcaggctggggggatgaacgcgcgggcg
aaagtcgccgggttgatgatgcgagccgacgcggcggcggcgctcagtcaactggacgtt
tttatctgggcctggccagacggcccgtcggatatgcgccgtcgacagcagctgctgacg
caggcggggtttaagtacagcgggcaatatacccacccggtgtcgagcatcgagcaggtg
gcgcagtggcgccagcgctggtatcgctcgccgctgcccttcgtcagcgacggtgtgatt
gtgcgcgaaggacgcgagccgccagggcgagtctggtcgcccggaaagggcgagtggctg
gctgcctggaaatatcctccggcatcgcgggtgatgcaggtacgggcgatccgtttcagt
accggccgcagcggcagactcaacgtggtggccgagcttgagccccagcggctggatgat
aaacgcgtgcagcgggttaacgttggctctgtgtcccgctggcagatgctggatattggg
gttggcgatcagctgcagatcagtctggcagggcagggtattcctcgggtcgacgccgtc
gtctggcggacggccgagcgccataaaccgacgccgccgccggcgaaatttaatgcgcta
acctgctatttcgccacccctgagtgcagcgaacagtttctttccaggctgatctggttg
tcatcaaagtccgccctgaatgtcgatggcgtgggggaaaatttatggcgcgtcattcag
cagcaaaacccgatgacgcatatcttttcctggctggcgcttaccgttgagcagctgcag
gcggtgccagggatttccgccgcccgcgggcagcacctctggcatcagtttgatcttgtt
cgcaaacgaccttttatccgctgggtgctggcgatggggatcccggtgccgcagggggcg
ctggcgcagctcgaaagcgagaactggcatttgctggcggcaaaaagtgaagcgcaatgg
cgcacgctgccgggcgtgggggagatcagagcccgccagctggtggctttcctgcaccat
ccggacgtggtggcgctggcgcaatggcttagcgggcagcgcatccccggattttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (27)   

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