KEGG   Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52): KPN_03475
Entry
KPN_03475         CDS       T00566                                 
Symbol
ygjF
Name
(GenBank) DNA glycosylase, G/U mismatch-specific
  KO
K03649  double-stranded uracil-DNA glycosylase [EC:3.2.2.28]
Organism
kpn  Klebsiella pneumoniae subsp. pneumoniae MGH 78578 (serotype K52)
Pathway
kpn03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:kpn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KPN_03475 (ygjF)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kpn03400]
    KPN_03475 (ygjF)
Enzymes [BR:kpn01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.28  double-stranded uracil-DNA glycosylase
     KPN_03475 (ygjF)
DNA repair and recombination proteins [BR:kpn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     KPN_03475 (ygjF)
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: ABR78871
UniProt: A6TE50
Position
complement(3802472..3802978)
AA seq 168 aa
MISDILAPGLRVVFCGINPGKSSAHTGFHFAHPGNRFWKVIHQAGFTDRQLRPEEELQLL
DTRCGITMLVERPTVQASEVALQELRSGGRELVRKIEEYQPQALAVLGKQAFELAFNQRG
AKWGKQAMTIGTTQVWVLPNPSGLNRATLDKLVAAYRELDDALATRGQ
NT seq 507 nt   +upstreamnt  +downstreamnt
atgattagcgatatccttgcgccgggcctgcgcgttgtcttttgcggtatcaacccgggg
aagtcctccgcccataccggctttcattttgcccatcctggcaatcgcttctggaaggtc
atccatcaggccgggttcaccgatcggcagctcaggccggaagaggagctgcagctgctg
gatacgcgctgcggcatcaccatgctggtagagcgtccgacggtgcaggccagcgaggtc
gccttgcaggagctgcgcagcggcggccgtgagctggtgcggaaaattgaggagtatcag
ccgcaggccctggcggtgctcggcaagcaggccttcgagctggcctttaaccagcgcggc
gcgaagtgggggaaacaggctatgaccatcgggacgacccaggtgtgggtgctgcctaat
cccagcggcttaaaccgggcgacgctcgataagctggtggcggcctatcgtgaactggac
gatgccctggcaacccgcggccagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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