KEGG   Klebsiella pneumoniae 32192: KU54_024455
Entry
KU54_024455       CDS       T03746                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
kpne  Klebsiella pneumoniae 32192
Pathway
kpne02024  Quorum sensing
kpne03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpne00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KU54_024455 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    KU54_024455 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kpne03019]
    KU54_024455 (hfq)
   03036 Chromosome and associated proteins [BR:kpne03036]
    KU54_024455 (hfq)
Messenger RNA biogenesis [BR:kpne03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     KU54_024455 (hfq)
Chromosome and associated proteins [BR:kpne03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    KU54_024455 (hfq)
SSDB
Motif
Pfam: Hfq LSM Herpes_capsid
Other DBs
NCBI-ProteinID: AJB59781
UniProt: A0A0W8AQN9
Position
complement(4842647..4842955)
AA seq 102 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAIS
TVVPSRPVSHHSNNAGGGSSNYHHGGSAQGSSAPQQDSDDAE
NT seq 309 nt   +upstreamnt  +downstreamnt
atggctaaggggcaatctttacaagatccgttcctgaacgctttgcgtcgggaacgcgtt
ccggtttctatttatttggtgaatggtatcaagctgcaagggcaaattgagtctttcgat
cagttcgtgatcctgttgaagaacacggtcagccagatggtctataagcacgcaatttct
actgttgtcccgtctcgcccggtgtctcaccacagcaacaatgctggcggcggttccagt
aactatcaccacggtggtagcgcgcagggttcttctgcgccgcaacaagacagcgacgac
gccgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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