KEGG   Klebsiella pneumoniae 34618: LI86_25865
Entry
LI86_25865        CDS       T03747                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
kpnu  Klebsiella pneumoniae 34618
Pathway
kpnu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kpnu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LI86_25865 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpnu03021]
    LI86_25865 (rho)
   03019 Messenger RNA biogenesis [BR:kpnu03019]
    LI86_25865 (rho)
Transcription machinery [BR:kpnu03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     LI86_25865 (rho)
Messenger RNA biogenesis [BR:kpnu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     LI86_25865 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT OB_RNB AAA_22 AAA_25 AAA FtsK_SpoIIIE
Other DBs
NCBI-ProteinID: AJB78513
UniProt: A0A085DEY6
Position
complement(5129791..5131050)
AA seq 419 aa
MNLTELKNTPVSELITLGENMGLENLARMRKQDIIFAILKQHSKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTISGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIAQSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVVASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDY
NRSGTRKEELLTTQEELQKMWILRKIIHPMGEIDAMEFLINKLAMTKTNDDFFDMMKRS
NT seq 1260 nt   +upstreamnt  +downstreamnt
atgaatcttaccgaattaaagaatacgccggtttctgagctgattactctcggcgaaaat
atggggctggaaaacctggctcgtatgcgtaagcaggatattatttttgccatcctcaag
cagcattcgaagagtggcgaagatatctttggcgacggcgtactggagatactgcaggat
ggatttggattcctccgctccgcagacagctcctacctcgccggccctgacgacatctac
gtatcccccagccaaatccgccgtttcaacctccgcactggtgacaccatttccggtaag
attcgtcctccgaaagagggtgaacgttactttgcgctgctgaaagttaacgaagttaac
tacgacaagccggaaaacgcgcgtaacaagatcctgttcgagaacttaacgccgctgcac
gcgaactctcgcctgcgtatggagcgtggtaacggttctaccgaagacttaaccgctcgc
gtactggatctggcctccccgattggccgcggccagcgtggtctgatcgtcgcgccgccg
aaggccggtaaaaccatgctgctgcagaatatcgcgcagagcatcgcatacaaccacccg
gactgtgtcctgatggtactgctgatcgacgaacgtccggaagaagtgaccgagatgcag
cgtctggtgaaaggtgaagtggttgcttccacctttgacgagccggcatcccgtcacgtg
caggttgccgagatggttattgagaaagcgaaacgtctggttgaacacaagaaagacgtt
atcatcctgctcgactctattacccgtctggcgcgtgcctacaacaccgtggttccggct
tccggtaaagtgttgaccggtggtgtggacgccaacgccctgcaccgtccgaagcgtttc
tttggtgcggcacgtaacgtcgaggagggcggtagcctgaccatcatcgccacggcgctg
atcgacaccggttccaaaatggacgaagttatctacgaagagtttaaaggcaccggtaac
atggaactgcacctctctcgtaagattgctgaaaaacgcgtcttcccggctatcgactac
aaccgttccggtacccgtaaagaagagctgcttaccactcaggaagagctgcagaaaatg
tggatcctgcgcaaaattatccatccgatgggtgagattgatgcgatggaattcctcatc
aataagctggcaatgaccaagacgaatgatgacttcttcgatatgatgaagcgctcgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (18)   

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