KEGG   Kosakonia pseudosacchari: IP581_21060
Entry
IP581_21060       CDS       T06897                                 
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
kpse  Kosakonia pseudosacchari
Pathway
kpse03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:kpse00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    IP581_21060 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kpse03021]
    IP581_21060 (rpoA)
   03400 DNA repair and recombination proteins [BR:kpse03400]
    IP581_21060 (rpoA)
Enzymes [BR:kpse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     IP581_21060 (rpoA)
Transcription machinery [BR:kpse03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     IP581_21060 (rpoA)
DNA repair and recombination proteins [BR:kpse03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      IP581_21060 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-ProteinID: QOV63688
Position
complement(4434685..4435674)
AA seq 329 aa
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDDVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASINMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADE
NT seq 990 nt   +upstreamnt  +downstreamnt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtgagt
tcgacgcacgccaaggtgacccttgagcctttagagcgtggctttggccatactctgggt
aacgcactgcgccgtattctgctctcatcgatgccgggttgcgcggtgactgaggttgag
attgatggtgtacttcatgagtacagcaccaaagaaggcgttcaggaagatatccttgaa
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgatgttattctt
actctgaataaatctggcattggccctgtgaccgcagccgacattacccacgacggtgat
gtcgaaatcgtcaagccgcagcatgtgatctgccacctgaccgatgagaacgcatctatc
aatatgcgtatcaaagttcagcgcggtcgtggttatgttccggcatctgcccgaattcat
tcggaagaagatgagcgcccaatcggccgtctgctcgttgacgcctgctacagccctgta
gagcgtattgcctacaatgttgaagcagcacgtgttgaacagcgtaccgacctggacaag
ctggtcatcgaaatggaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcg
gcaaccattctggctgaacaacttgaagctttcgttgatttgcgtgatgtacgtcagccg
gaagttaaagaagagaaaccagaattcgatccgattctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactatatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgccgaacctgggtaaaaaatctctt
actgagattaaagacgtgctggcctcccgcggtctgtctctgggcatgcgccttgaaaac
tggccgccggcaagcattgctgacgagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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