KEGG T00910: KP1

Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1): KP1_4437

Entry

KP1_4437          CDS       T00910

Symbol

ygdE

Name

(GenBank) putative RNA 2'-O-ribose methyltransferase

K06968

23S rRNA (cytidine2498-2'-O)-methyltransferase [EC:2.1.1.186]

Organism

kpu Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044 (serotype K1)

Brite

KEGG Orthology (KO) [BR:kpu00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:kpu03009]
    KP1_4437 (ygdE)
Enzymes [BR:kpu01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.186  23S rRNA (cytidine2498-2'-O)-methyltransferase
     KP1_4437 (ygdE)
Ribosome biogenesis [BR:kpu03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    KP1_4437 (ygdE)

SSDB

Motif

Pfam:

RLMM_N RlmM_FDX FtsJ Spt5-NGN MIT_C

Other DBs

NCBI-ProteinID:

BAH64947

Position

complement(4261547..4262647)

AA seq 366 aa
MNKVVLYCRPGFEKECAAEITDKAARLEVFGFARVKEDSGYVIFEGYQQDDGEKLVRDLP
FSSLIFARQMFVVGELLRDLPPEDRITPIVGMLQGVVEKGGELRVEVADTNESKELMKFC
RKFTVPLRAALREAGVLTNYETPKRPVVHVFFIAPGCCYTGYSYSNNNSPFYMGIPRLKF
PSDAPSRSTLKLEEAFHVFIPADEWDERLANGMYAVDLGACPGGWTYQLVKRNMWVSSVD
NGPMAQSLMDTGQVTWLREDGFRYRPNRNNISWMVCDMVEKPAKVAALMAQWLVNGWCRE
TIFNLKLPMKKRYEEVSQNLAYIQAQLDEHGVNAQIQARQLYHDREEVTVHVRRLWAAVG
GRRDER

NT seq 1101 nt +upstreamnt +downstreamnt
atgaataaggttgtcctctattgtcgccctgggtttgagaaagagtgcgcagcagaaatt
accgataaggcagcccgccttgaggtgtttggttttgcccgggtcaaagaagactctggc
tatgtaatttttgaaggttatcagcaggacgacggcgagaagctggtgcgcgatctgccg
ttcagctcgctaattttcgcccgacagatgtttgtggtcggcgaactgctgcgcgacctg
ccgccggaggatcgcataaccccgatcgtcggcatgctgcagggcgtggtggagaagggt
ggcgagctgcgtgtggaagtggcggataccaacgaaagcaaagagctgatgaagttctgc
cgcaagtttacggtgccgttacgcgcggcgctgcgcgaggcgggcgtgctgaccaactat
gaaacgccaaagcgaccggtggtgcatgtgttctttatcgcacccggctgctgctatacc
ggctactcatacagcaacaacaactcaccgttctatatgggcattccgcggctgaagttt
ccgtccgacgccccgagccgttccaccctcaagctggaagaggcgttccacgtctttatt
ccggcggacgagtgggacgagcgtctggcgaacggcatgtatgccgtcgatctcggcgcc
tgcccgggcggctggacctatcagctggtgaagcgcaacatgtgggtctcttcggtcgat
aacggcccgatggcccagagcctgatggataccggccaggtgacctggctgcgcgaagac
ggtttccgctatcgtccgaaccgcaacaacatctcgtggatggtctgcgatatggtggag
aaaccggcgaaggtggcggcgctgatggcgcagtggctggtcaacggctggtgccgggag
accatcttcaacctcaagctgccgatgaaaaagcgctatgaagaggtgtcgcagaatctg
gcctatattcaggcccagctggacgagcacggcgttaacgcccagatccaggcgcgtcag
ctgtatcacgatcgtgaagaggtgaccgttcacgtgcgccgcctgtgggccgccgtcggc
ggacgtcgcgacgagcgttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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