KEGG   Klebsiella pneumoniae PMK1: PMK1_01692
Entry
PMK1_01692        CDS       T03419                                 
Symbol
rafR
Name
(GenBank) Raffinose operon repressor
  KO
K02529  LacI family transcriptional regulator, galactose operon repressor
Organism
kpx  Klebsiella pneumoniae PMK1
Brite
KEGG Orthology (KO) [BR:kpx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:kpx03000]
    PMK1_01692 (rafR)
Transcription factors [BR:kpx03000]
 Prokaryotic type
  Helix-turn-helix
   LacI family
    PMK1_01692 (rafR)
SSDB
Motif
Pfam: Peripla_BP_1 Peripla_BP_3 LacI HTH_3 Peripla_BP_4 HTH_23 HTH_Tnp_ISL3 HTH_11 Sigma70_r4_2 HTH_24 HTH_28 HTH_38 HTH_Crp_2 HTH_10 HTH_7 HTH_36 HTH_50 DUF4148 HTH_IclR GntR HTH_31 HTH_8 DUF5635
Other DBs
NCBI-ProteinID: AIT01181
UniProt: A0A0C7KB84
Position
1809651..1810646
AA seq 331 aa
MSLKAIAKQLGISVTTVSRALNGYDDVSQETRARVEAEAQRRGYRPNTFARRLKMGTIDA
VGLVFPVRPAPLNNNVFLEMVGEISHELARHDIDLLLIADDEQADKHGYMRMVQGRRVDA
LIVAHTLDDDPRLAQLQASGFPFLALGRSRLAQPYAWFDFDNYAGTCRATRHLIQQGHQR
IALLGENNNQAFILQRRNGYLDALREAGLSDAWLRSVPATRRAGYQATLELLRLPEPPTA
IITDCNTHGDGAAMALAHLGRLTGDNRVALVVYDGLPQDSIIETDVAAVIQSTRQGVGRQ
IADMVRRLIAGEDLATLQVLWQPEFFPGETA
NT seq 996 nt   +upstreamnt  +downstreamnt
atgtcgctgaaagccattgccaaacaacttgggatctccgtcacgaccgtcagccgggcg
ttgaacggctacgacgatgtgtcgcaggagacccgcgcccgggttgaggctgaagcgcag
cgccggggctatcgccccaacactttcgcccgccgcctgaaaatgggcaccatcgatgcc
gttggtctcgtcttccctgtccgccccgcgccgctcaacaataacgtttttctcgagatg
gtcggggagatcagccatgagctggcgcgccatgacattgatttgttgctgatcgccgat
gatgagcaggcggataaacatggctatatgcgcatggtgcagggccgtcgcgtcgatgca
ttaatcgtggcccatactctggatgacgatccgcggctggcgcagctgcaggcctccggc
tttccgtttctggcgctcggccgtagccgcctggcgcagccctacgcctggtttgatttc
gataactatgccggcacctgccgcgccacccgccatctgattcaacagggccaccagcgt
atcgctctgctgggcgagaacaacaatcaggcgtttattttgcaacggcgtaacggctac
ctcgatgccctgcgcgaggcggggttatccgatgcatggctgcgtagcgtgccggcgacg
cgccgcgccggctatcaggccacgctggagctgctgcgtctgcctgagccgcctaccgcg
attatcaccgactgcaacacccatggcgatggcgccgcgatggcgctcgctcacctgggg
cgtttaaccggcgacaaccgcgtcgccctggtggtgtacgacgggctgccgcaggacagc
atcattgagaccgatgtcgccgcggtgatccagtccacgcgccagggcgtgggacggcag
attgccgatatggtgcgtcgcttaatcgccggggaggatctcgccacgctgcaggtgcta
tggcagccggaatttttcccgggtgaaaccgcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (23)   
   Pfam (23)   
All databases (30)   

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