KEGG   Kineococcus radiotolerans: Krad_1179Help
Entry
Krad_1179         CDS       T00562                                 

Definition
(GenBank) UvrD/REP helicase
  KO
K03657  DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]
Organism
kra  Kineococcus radiotolerans
Pathway
kra03420  Nucleotide excision repair
kra03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:kra00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Krad_1179
   03430 Mismatch repair
    Krad_1179
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:kra03400]
    Krad_1179
Enzymes [BR:kra01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.12  DNA helicase
     Krad_1179
DNA repair and recombination proteins [BR:kra03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Krad_1179
   MMR (mismatch exicision repair)
    Other MMR factors
     Krad_1179
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 HRDC UvrD_C_2 AAA_30 Viral_helicase1
Motif
Other DBs
NCBI-ProteinID: ABS02667
UniProt: A6W778
Position
complement(1070846..1072951)
Genome map
AA seq 701 aa AA seqDB search
MTTTTTTRPDADSVLAGLDPEQRQVATTLEGPVCVLAGAGTGKTRAITHRIAYAVHSGAY
VPNRVLAVTFTARAAGEMRTRLRDLGVAGVQARTFHAAALRQLQFFWPQSIGGTLPNLVE
HKAPLIADACNRLRIPADRTRVRDLSAEVEWTKVMLVDPDDYVRVAAAAGRGEPGGLDLA
SVARLVRTYEDVKTDRAVIDFEDVLLLTAGILDERPDVAATVREQYRHFVVDEYQDVSPL
QQRLLDLWLGGRQDLCVVGDASQTIYSFAGATPEHLLDFPRRHPGTTVVRLVRDYRSTPE
VVGLANSVLSMATGRHAQARLELIAQRPSGPPPSFTAYDDDVAEASGVAARIAAEVRAGR
SAKDIAILFRTNGQSQALESALADAGVGYVVRGGERFFSRKEVRDAIVLLRGGARAALPG
HDLGTETRAVLSSAGWDEKAPTAGGATRERWESLQALVVLADELAEKRPGAQLSDLVDEL
VERSQAQHAPTVDGVTLASFHAAKGLEWDVVFLVGVSEGLLPISFAETPDDVEEERRLLY
VGVTRAREGIHLSWANSRTPGGRATRKPSRFLDAVRPQAAPAGRRAGAVTPAGARTKRTS
GPLLCRVCGASLTVAVERKLGRCTDCPSSYDEAVFERLREWRSATCKAAEVPAYVVFTDA
TLVAIAEAMPGDTAALARIPGVGPAKLEKYADDVLAVLAAG
NT seq 2106 nt NT seq  +upstreamnt  +downstreamnt
atgacgacgaccaccacgacgcgccccgacgccgactccgtcctcgccggcctcgacccc
gagcagcgccaggtcgcgacgaccctcgagggtcccgtctgcgtgctggccggggcgggc
acgggcaagacgcgggccatcacccaccgcatcgcctacgccgtgcactccggcgcgtac
gtgcccaaccgcgtcttggcggtcaccttcaccgcgcgcgccgcgggggagatgcggacc
cgcctgcgcgacctcggcgtcgccggcgtccaggcccggaccttccacgccgccgcgctg
cggcagctgcagttcttctggccgcagtccatcggcgggacgctgccgaacctggtcgag
cacaaggccccgctcatcgccgacgcctgcaaccggctgcggatcccggccgaccgcacc
cgggtgcgggacctgtccgcggaggtcgagtggaccaaggtcatgctcgtcgaccccgac
gactacgtgcgcgtcgcggccgccgccgggcgcggggagccgggcgggctcgacctcgcc
tccgtggcccgcctcgtgcgcacctacgaggacgtcaagaccgaccgggccgtcatcgac
ttcgaggacgtcctgctgctgaccgcgggcatcctcgacgagcggcccgacgtcgccgcg
accgtccgcgagcagtaccgccacttcgtcgtcgacgagtaccaggacgtctccccgctg
cagcagcggctgctggacctgtggctgggcgggcgccaggacctctgcgtggtcggcgac
gccagccagaccatctactccttcgccggggccacccccgagcacctgctggacttcccc
cgccgccaccccggcacgaccgtggtgcggctcgtgcgcgactaccgctccacccccgag
gtcgtcggcctggcgaactcggtgctgtcgatggccaccgggcggcacgcgcaggcccgc
ctggagctcatcgcccagcgtccctccggcccgccgccctccttcaccgcctacgacgac
gacgtcgccgaggcctccggggtcgcggcccgcatcgccgcggaggtccgcgccgggcgc
agcgcgaaggacatcgcgatcctgttccgcaccaacggccagtcgcaggccctggagtcc
gccctcgccgacgccggggtcggctacgtcgtgcggggcggggagcggttcttctcccgc
aaggaggtccgcgacgcgatcgtgctgctgcgcggcggcgcccgggcggccctgccgggc
cacgacctcggcaccgagacccgggcggtgctgtcctcggcgggctgggacgagaaggcc
cccaccgccgggggggcgacccgcgagcgctgggagtcgctgcaggcgctggtcgtgctg
gccgacgagctggccgagaagcgcccgggggcgcagctgagcgacctggtggacgagctg
gtggaacgcagccaggcccagcacgccccgaccgtggacggggtgacgctggcctccttc
cacgcggccaagggcctggagtgggacgtggtgttcctggtcggggtgagcgaggggctg
ctgccgatctcgttcgcggagacccccgacgacgtcgaggaggagcgccggctgctctac
gtcggggtgacccgtgcgcgcgaggggatccacctgtcctgggcgaactcccggaccccg
ggcgggcgggccacccgcaagccctcccgcttcctcgacgcggtccgcccgcaggcggcg
cccgccgggcgtcgcgccggtgcggtcacgcccgcgggggcccgcaccaagcgcaccagc
ggcccgctgctctgccgggtctgcggggcctcgctcaccgtggccgtggagcgcaagctc
gggcgctgcaccgactgcccctccagctacgacgaggccgtcttcgagaggttgcgcgag
tggcgcagcgcgacgtgcaaggcggccgaggtgccggcctacgtcgtgttcaccgacgcc
accctggtcgcgatcgccgaggcgatgcccggcgacaccgcggccctggcccggatcccc
ggggtgggcccggcgaagctggagaagtacgccgacgacgtgctggcggtcctggccgcc
ggctga

DBGET integrated database retrieval system