KEGG   Kosakonia radicincitans: A3780_17400
Entry
A3780_17400       CDS       T04579                                 
Name
(GenBank) ATP-dependent RNA helicase SrmB
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:5.6.2.7]
Organism
krd  Kosakonia radicincitans
Brite
KEGG Orthology (KO) [BR:krd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:krd03009]
    A3780_17400
Enzymes [BR:krd01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     A3780_17400
Ribosome biogenesis [BR:krd03009]
 Prokaryotic type
  rRNA helicases
   A3780_17400
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 AAA_22 CMS1
Other DBs
NCBI-ProteinID: APG19253
Position
3810154..3811482
AA seq 442 aa
MTVTTFSELELDDSLLDALQDKGFTRPTAIQAAAIPPALEGRDVLGSAPTGTGKTAAYLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADHARELAANTHLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIEHIAGETRW
RKQTMLFSATLEGDAIKNFAERLLEDPVEVSATPSTRERKKIHQWYYRADNLEHKTALLI
HLLKQPEVSRSIVFVRKRERVHELAGWLREAGINNCYLEGEMVQVKRNEAIKRLTDGRVN
VLIATDVAARGIDIPDVSHVINFDMPRSGDTYLHRIGRTGRAGRKGAAISLVEAHDHLLL
GKVGRYVEEPLKARVVDELRPTTRVPSEKLKGKPSKKVLAKREEKKKEKEKPRVKQRHRD
TKNIGKRRKPSAANSEQQKTEE
NT seq 1329 nt   +upstreamnt  +downstreamnt
atgactgtaacgactttttccgaactcgaacttgacgacagcctgctggacgcgctccag
gataaaggctttacgcgcccaaccgctatccaggcagctgccattccgcctgcgcttgag
gggcgtgacgtccttggttctgcgcctactggtaccggtaaaacggcggcctatctgctg
ccagcgttgcaacaccttctggactttccacgtaagaaatccggcccaccgcgtattctg
atcctgacgccaacccgcgagctggcaatgcaggttgccgatcatgcccgtgaactggcg
gcgaatacccatctggatatcgctaccattactggcggcgtcgcctatatgaaccacgct
gaagtgttcagcgaaaatcaggatattgtggttgccaccaccggtcgcctgctgcaatac
attaaagaagagaacttcgactgtcgtgcggtagaaacgctgatcctcgatgaagccgat
cgcatgctggatatgggcttcgcgcaggatatcgagcacatcgcgggtgaaactcgctgg
cgcaaacagacgatgctgttttccgcaacgcttgaaggcgacgcgatcaaaaatttcgcc
gaacgtctgctggaagatcccgtcgaagtctccgccacaccgtcaacgcgcgaacgtaag
aaaattcaccagtggtactaccgcgccgacaaccttgaacacaaaactgcactgctgata
cacctgctaaaacagccggaagtcagccgttctatcgtcttcgtgcgtaaacgtgaacgc
gtgcatgagctggcaggctggctgcgcgaagcgggcatcaataactgctatctcgaaggc
gagatggtacaggtgaagcgcaacgaagcgatcaaacgtctgaccgacggtcgcgtcaat
gtgctgatcgccaccgatgtcgctgcgcgtggtatcgacattccggatgtcagccacgtc
attaacttcgatatgccgcgcagtggcgacacctacctgcaccgtattggccgtaccggc
cgcgccggtcgcaaaggcgcagctatctccctggttgaagcgcacgatcatctgttgctg
ggcaaagtaggccgttacgttgaagagccgctgaaagcccgcgtcgtggacgaactgcgc
ccgacaacacgagtgccaagcgagaagctgaaaggcaagccgtcgaaaaaagtgctggcc
aaacgcgaagagaagaaaaaagagaaagagaagccgcgcgtgaagcaacgccatcgcgat
accaaaaacatcggtaagcgacgcaaacccagtgctgcaaacagcgagcagcaaaaaaca
gaagaataa

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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