KEGG   Kocuria rhizophila: KRH_01420
Entry
KRH_01420         CDS       T00701                                 
Name
(GenBank) UvrA-like protein
  KO
K03701  excinuclease ABC subunit A
Organism
krh  Kocuria rhizophila
Pathway
krh03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:krh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    KRH_01420
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:krh03400]
    KRH_01420
DNA repair and recombination proteins [BR:krh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     KRH_01420
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      KRH_01420
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind DnaJ_CXXCXGXG SMC_N AAA_21 nSTAND1 AAA_29 AAA_16 RsgA_GTPase Anti-TRAP
Other DBs
NCBI-ProteinID: BAG28489
NITE: KRH_01420
UniProt: B2GKJ8
Position
complement(150892..153555)
AA seq 887 aa
MTIEQNGTASWQHGVVVRGARQNNLRDVSLDLPRDAIVVFTGVSGSGKSSLAFGTLFAES
QRRYLESVAPYARRLIDQAGVPDVDVIEGLPPAVALQQQRGGGGARSDVATVTTLSSLVR
MLYSRAGWYPPGQGMLYAEDFSANTVQGACPTCHGIGRVYEVTEDSMVPDPSLTIRERAV
ASWPVAWAGQNQRDILVSLGYDVDTPWKDLPQKDRDWILYTEERPTVGVYRGLSPNQTRK
AQQEGVEPTYQGTFIGARRYVLDTFANAKSPSTKKRAAQYLTSELCPECHGKKIKKEALS
VTFEGLDIAAFSHLPLARLAEIARAVAADGWTPSEAGHLPDHVLDTESRAASTASRVAQG
GASHDAAPDVRRTPNLSVEKRAAAQRLAADLVARLQPMIDLGLGYLSLDRTTPTLSGGER
QRLRLATQLSSKLFGVAYVLDEPSAGLHPRDLDALIGILHGLKDRGNSLFIVEHSLTVIH
EADWLVDIGPDAGERGGRVLYSGDPRGLADVPESATRRYLFPEQATAPAARAPRTPRGWL
ALEEVTRNNLRGLDVSFPAGCLTAVTGISGSGKSSLVSQALPVLVRERLGQRTGESQEIT
GDPESDLLTADDAAEDVRGKVTSAPGGVRRVVVIDQKPIGRTPRSNVATYTGLFDDVRKL
YAATDEAKERGYKAGRFSFNVVGGRCPTCEGEGSVMVELLFLPSVYAPCPDCHGTRYKAS
TLEVLWRERSVADVLGMSVDEAHAFFEGEDSIHHSLGVLRDVGLGYLRLGQPATELSGGE
AQRVKLASELQRASRGDTLYVLDEPTAGLHPADSDRLMNHLQGLADAGNTVVMAELDMRM
VAQADHVVDMGPGAGADGGRVVAAGTPHDVAAHSDGATAPYLKAVMA
NT seq 2664 nt   +upstreamnt  +downstreamnt
gtgactatcgagcagaacggcaccgcatcctggcagcacggcgtagtggtgcgcggcgcg
cgccagaacaacctccgggacgtctccctggacctgccccgggacgccatcgtggtgttc
acgggggtgtccggctcggggaagtcgtccctcgcgttcggcacgctgttcgcggagtcg
cagcggcgctacctggagtccgtggcgccgtacgcgcggcggctcatcgaccaggcgggc
gtcccggacgtggacgtgatcgaggggctgccgcctgccgtcgccctccagcagcagcgc
ggcgggggcggagcgcgctcggacgtggccaccgtgaccaccctgtccagcctggtccgg
atgctgtactcgcgcgccgggtggtaccccccggggcaggggatgctctacgcggaggac
ttctccgcgaacaccgtgcagggcgcctgccccacctgccacggcatcgggcgagtgtac
gaggtcaccgaggactccatggtcccggacccgtccctgaccatccgcgagcgcgccgtc
gcctcctggcccgtggcgtgggcgggacagaaccagcgggacatcctcgtgtccctgggc
tacgacgtggacaccccctggaaggacctcccgcagaaggaccgcgactggatcctctac
accgaagagcgccccacggtgggcgtgtaccgcgggctcagccccaaccagacgcgcaag
gcccagcaagagggtgtggagcccacctaccagggcacgttcatcggggcgcggcgctac
gtgctggacaccttcgccaacgccaagagccccagcaccaagaagcgcgcggcccagtac
ctcaccagcgagctgtgcccggagtgccacggcaagaagatcaagaaggaggccctgtcg
gtcacgttcgagggcctggacatcgccgcgttctcgcacctcccactcgcgcgcctcgcg
gagattgcacgcgccgtggccgcggacggctggaccccgagcgaggccggtcacctgccg
gaccacgtgctggacaccgagtcccgcgcggcctccaccgcctcgcgggtggcgcaggga
ggggcctcgcacgacgccgccccggacgtccggcgcaccccgaacctctcggtggagaag
cgtgccgccgcccagcgcctggccgcggacctcgtggcgcggctgcagcccatgatcgac
ctgggcctgggctacctctccctggaccgcaccacgcccacgctctccgggggtgagcgg
cagcggctgcgcctggccacgcagctctcctccaagctcttcggggtggcgtacgtcctg
gacgagccctccgcgggtctgcacccccgtgacctggacgcgctgatcgggatcctgcac
gggctcaaggaccgcggcaacagcctgttcatcgtggagcactcgctcacggtgatccac
gaggcggactggctcgtggacatcggccccgacgccggcgagcgcggcgggcgcgtgctc
tacagcggggatccccggggcctcgcggacgttcccgagtccgcgacgcgccgctacctc
ttcccggagcaggccaccgctcccgcagcccgcgcaccgcgcacgccgcgcggatggctc
gccctcgaagaggtcacccgcaacaacctgcgcggcctggacgtgagcttccccgccggg
tgcctcaccgccgtcacgggcatctccggctccggcaagtccagcctggtcagccaggcc
ctgccggtcctcgtgcgcgagcgcctgggccagcgcacgggcgagtcccaggagatcacg
ggcgatccggagtcggacctgctgacggccgacgacgccgccgaggacgtccgcgggaag
gtcacctcggcgccgggaggcgtgcggcgcgtcgtcgtgatcgaccagaagccgatcggc
cgcacgccgcgctccaacgtggccacctacacggggctgttcgacgacgtccgcaagctc
tacgccgccacggacgaggccaaggagcgcgggtacaaggccgggcggttctcgttcaac
gtggtgggcgggcgctgccccacgtgcgagggcgagggcagcgtgatggtggagctgctg
ttcctgcccagcgtgtacgccccgtgcccggactgccacggcacccggtacaaggcgagc
accctggaggtgctgtggcgggagcgctccgtggcggacgtgctgggcatgagcgtggac
gaggcgcacgcgttcttcgagggtgaggactccatccaccacagcctgggcgtgctgcgg
gacgtggggctcggctacctgcggctgggccagccggccacggagctctcgggcggtgag
gcccagcgggtcaagctcgcgtccgagctgcagcgggcctcccgcggggacaccctctac
gtgctggacgagcccaccgcgggtctgcacccggcggacagcgaccggctcatgaaccac
ctgcaggggctcgcggacgcgggcaacacggtggtcatggccgagctggacatgcgcatg
gtcgcccaggcggaccacgtggtggacatgggccccggcgcgggagccgacggcggccgg
gtggtcgcggcgggcaccccgcacgacgtcgccgcgcactcggacggcgccacggcaccg
tacctaaaggccgtcatggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (31)   

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