KEGG   Kocuria rhizophila: KRH_01640
Entry
KRH_01640         CDS       T00701                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
krh  Kocuria rhizophila
Pathway
krh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:krh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    KRH_01640 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:krh03400]
    KRH_01640 (xthA)
Enzymes [BR:krh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     KRH_01640 (xthA)
DNA repair and recombination proteins [BR:krh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     KRH_01640 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: BAG28511
NITE: KRH_01640
UniProt: B2GKM0
Position
complement(181247..182053)
AA seq 268 aa
MRIATWNVNSIRARADRIEAWLDRSDVDVLAIQETKAKDENFPWELFEFAGYEVAHFGVN
QWNGVAIASRVGLTDVQRTFPDQPTFGKPGQEPAQEARAIGATCGGVRVWSLYVPNGRGL
DDPHMPYKLEWLRVLEGHAKQWLQEDPDAQIALVGDWNVAPQDDDVWDIQLFKEGGYTHV
SEPERAAFHAFIEDAGYQDVVRPRHPGPGVYTYWDYKQLRFPKKEGMRIDFQLCSPALAA
RVQDAWIDRDERKGKGASDHAPVVIEID
NT seq 807 nt   +upstreamnt  +downstreamnt
atgagaatcgccacgtggaacgtgaactccatccgcgcccgcgccgaccgcatcgaggcg
tggctcgaccgctccgacgtggacgtgctggccatccaggagaccaaggccaaggacgag
aacttcccgtgggagctgttcgagttcgcgggctacgaggtggcccacttcggcgtgaac
cagtggaacggcgtggcgatcgcctcccgcgtggggctcacggacgtgcagcgcaccttc
ccggaccagcccacgttcggcaagcccggccaggagccggcgcaggaggcccgcgcgatc
ggcgccacgtgcggcggtgtgcgcgtgtggtccctctacgtgcccaacggccgcggcctg
gacgacccccacatgccgtacaagctcgagtggctgcgcgtgctggagggccatgccaag
cagtggctgcaggaggacccggacgcgcagatcgccctggtgggcgactggaacgtggcc
ccgcaggacgacgacgtgtgggacatccagctcttcaaggagggcggctacacccacgtc
agcgaacccgagcgcgcggcattccacgcgttcatcgaggacgccggctaccaggacgtc
gtgcgcccgcgccaccccggccccggcgtctacacctactgggactacaagcagctgcgc
ttccccaagaaggagggcatgcgcatcgacttccagctgtgctcccccgcactggccgcg
cgcgtgcaggacgcctggatcgaccgcgacgagcgcaagggcaagggcgcctcggaccac
gcgcccgtcgtgatcgagatcgactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (16)   

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