KEGG   Kocuria rhizophila: KRH_13640
Entry
KRH_13640         CDS       T00701                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
krh  Kocuria rhizophila
Pathway
krh03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:krh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    KRH_13640 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:krh03400]
    KRH_13640 (ruvB)
Enzymes [BR:krh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KRH_13640 (ruvB)
DNA repair and recombination proteins [BR:krh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KRH_13640 (ruvB)
    RecFOR pathway proteins
     KRH_13640 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_16 Mg_chelatase TIP49 AAA_22 nSTAND3 Sigma54_activat AAA_14 AAA_3 RNA_helicase Rad17 NTPase_1 DUF815 TsaE IstB_IS21 AAA_17 AAA_18 Sigma54_activ_2 NACHT AAA_19 AAA_33 AAA_28 NB-ARC ABC_tran
Other DBs
NCBI-ProteinID: BAG29711
NITE: KRH_13640
UniProt: B2GIL8
Position
complement(1538582..1539682)
AA seq 366 aa
MAVEERGAAGPQRLVGAEGDYDDQQLEASLRPGTLDDFVGQKRVRAQLSLVLEASKLRGR
TADHVLLSGPPGLGKTTLAMIIAEELEVPLRISSGPAIQHAGDLAAILSSLTHGEVLFLD
EIHRMSRPAEEMLYMAMEDFRVDIVVGKGAGATSIPLDLPPFTLVGATTRAGLLPGPLRD
RFGFTGHLEFYSVPELELVLRRSAGLLDLAMTSEAFSEVASRSRGTPRIANRLLRRVRDW
ALVHGVERIDARAAGAALDMYEVDARGLDRLDRNVLSALVGKFNGGPVGLSTLAIAVGEE
TETVETVAEPFLVREGLLGRTPRGRIAMAAAWEHLGLAVPDHAAFKDPALRTALATEPEG
HDSSSA
NT seq 1101 nt   +upstreamnt  +downstreamnt
gtggccgtggaggagcgcggggccgcggggccgcagcggctcgtgggcgccgagggtgac
tacgacgaccagcagctggaggcgtcgctgcgtccgggcacgctcgacgacttcgtgggg
cagaagcgggtgcgggcccagctgtccctcgtgctggaggcctccaagctgcgcgggcgc
accgcggaccacgtgctgctctccgggcccccgggtctgggcaagaccaccctggccatg
atcattgcggaggagctggaggtcccgctgcggatctcctcgggccccgcgatccagcac
gccggggacctcgccgccatcctctcctcgctgacccacggggaggtgctgttcctcgac
gagatccaccggatgtcccgcccggccgaggagatgctctacatggccatggaggacttc
cgcgtggacatcgtggtgggcaagggcgccggcgccacctccatccccctggacctgccg
ccgttcacgctcgtgggtgccaccacgcgcgccggtctgctgcccggtccgttgcgggac
cgtttcgggttcacgggccacctggagttctactcggtcccggagctggagctcgtgctg
cgccgctcggcggggctgctggacctggccatgacctccgaggcgttcagcgaggtggcg
tcccgctcgcgcggcaccccgcgcatcgccaaccggctgctgcgccgggtgcgggactgg
gcgctcgtgcacggtgtggagcgcatcgacgcccgcgcggccggcgccgccctggacatg
tacgaggtggacgcccgcggactggaccggctggaccgcaacgtgctctccgccctggtg
ggcaagttcaacggaggcccggtgggactgtccacccttgcgatcgccgtgggggaggag
accgagaccgtggagaccgtggcggagccgttcctcgtgcgggaagggctgctcgggcgc
accccgcgcgggcggatcgcgatggccgccgcgtgggagcacctggggctcgcggtcccg
gaccacgcggccttcaaggatcccgcgttgcgcacggccctggccacggagcccgagggg
cacgactcatccagcgcgtga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (28)   
   Pfam (28)   
All databases (44)   

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