KEGG   Kocuria rhizophila: KRH_23430
Entry
KRH_23430         CDS       T00701                                 
Name
(GenBank) tRNA nucleotidyltransferase
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
krh  Kocuria rhizophila
Pathway
krh03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:krh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KRH_23430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:krh03019]
    KRH_23430
Enzymes [BR:krh01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     KRH_23430
Messenger RNA biogenesis [BR:krh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     KRH_23430
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2
Other DBs
NCBI-ProteinID: BAG30690
NITE: KRH_23430
UniProt: B2GJE2
Position
complement(2681081..2682517)
AA seq 478 aa
MARIMTQLLDTSSLHPVSLELGRLFERAGHELSLVGGPVRDLLLGREALDLDFTTDASPD
QTLAVIRDWADAHWEIGRDFGTIGMRKAGMQLEVTTYRAEAYDPGSRKPTVAFGDDLTED
LRRRDFTVNAMALRLPGLELVDPFGGIRDLHAGVLRTPGTPEDSFTDDPLRMMRAARFTS
QLGLTVAEPVREAMTAMAQRIEIVSAERVREELVKLVCGAHPRRGIELMVDTGLAQIVLP
EVPALQLETDEAHHHKDVYQHSLTVMEQAAEKETGPDGPVPAPDFVLRFAALMHDVGKPA
TRRFEPSGAVSFRHHEVVGAKLTRKRMKALRFDNDTVKKVTRLVELHMRFYGYGEADWTD
SAVRRYVRDAGDELERLHRLTRSDVTTRNRRKASRLAGHYDELERRIAQLAEQEQLQAVR
PELDGQQIMEILGIPPGPQVGRAYAFLLEMRLDEGAVGEDVARERLLRWAREKGIIDS
NT seq 1437 nt   +upstreamnt  +downstreamnt
atggctcgcatcatgacgcagctgctggacacctcctccctccatcccgtctccctcgaa
ctgggccggctcttcgagcgcgccgggcacgagctgtccctcgtgggagggccggtccgg
gacctgctgctcgggcgcgaggccctggacctggacttcaccacggacgcgagcccggac
cagacgctcgcggtcatccgcgactgggcggacgcgcactgggagatcgggcgggacttc
gggaccatcgggatgcgcaaggcggggatgcagctggaggtcaccacctaccgcgcggag
gcctacgaccccgggtcccgcaagcccaccgtggcgttcggggacgacctcacggaggac
ctgcggcgccgcgacttcaccgtcaacgccatggccctgcggctgccgggcctggagctc
gtggatccgttcgggggcatcagggacctgcacgccggtgtgctgcgcaccccggggacc
ccggaggactccttcacggacgaccccctgcgcatgatgcgcgccgcgcggttcacgtcc
cagctggggctgaccgtggcggagcccgtgcgggaggccatgacggccatggcccagcgg
atcgagatcgtctccgccgagcgcgtgcgggaggagctggtcaagctggtctgcggtgcc
cacccgcggcggggcatcgagctcatggtggacaccgggctcgcgcagatcgtgctccct
gaagtcccggcgctgcagctggagacggacgaggcgcaccaccacaaggacgtctaccag
cattccctcacggtcatggaacaggccgcagagaaggagacgggcccggacggcccggtc
cccgccccggacttcgtgctgcgcttcgccgccctgatgcacgacgtgggcaagcccgcc
acccggcgcttcgagccgtccggggcggtgagcttccggcaccacgaggtggtgggcgcc
aagctcacccgcaagcgcatgaaggcgctgcgcttcgacaacgacaccgtcaaaaaggtc
acgcggctcgtcgagctgcatatgcgcttctacggatatggcgaggcggactggaccgac
tccgcggtgcgccgctacgtgcgggacgccggggacgagctcgagcgcctgcaccggctg
acccgttcggacgtgaccacgcgcaaccgccgcaaggcctcccgcctggcggggcactac
gacgaactcgaacggcgcatcgcccagctcgccgagcaggagcagctccaggccgtgcgg
cccgagctggacggtcagcagatcatggagatcctgggcatcccgccgggaccccaggtg
gggcgggcctacgccttcctgctggagatgcggctggacgagggcgccgtgggggaggac
gtcgcccgggagcggctgctgcggtgggcgcgagagaaggggatcatcgactcctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NITE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (24)   

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