KEGG T06074: EQG70

Kocuria rosea: EQG70_05155

Entry

EQG70_05155       CDS       T06074

Symbol

topA

Name

(GenBank) type I DNA topoisomerase

K03168

DNA topoisomerase I [EC:5.6.2.1]

Organism

krs Kocuria rosea

Brite

KEGG Orthology (KO) [BR:krs00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:krs03032]
    EQG70_05155 (topA)
   03400 DNA repair and recombination proteins [BR:krs03400]
    EQG70_05155 (topA)
Enzymes [BR:krs01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     EQG70_05155 (topA)
DNA replication proteins [BR:krs03032]
Prokaryotic type
  DNA Topoisomerases
   EQG70_05155 (topA)
DNA repair and recombination proteins [BR:krs03400]
Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      EQG70_05155 (topA)

SSDB

Motif

Pfam:

Topoisom_bac Toprim_C_rpt Toprim Toprim_4 SBP_bac_3

Other DBs

NCBI-ProteinID:

QCY32334

Position

1119071..1121902

AA seq 943 aa
MPTKATQSPGTGKSLLIVESPSKVKTIAGYLGDAYEVESSMGHIRDLPQPSELPAELKKG
PYGKFAVDVEHGFEPYYVVNPDKKKKVTELRRKLKDADALYLATDGDREGEAIAWHLLEV
LKPKIPVYRLTFSEITREAIERAFGELRELDQDLVDAQETRRILDRLYGYEISPVLWRKI
ASGLSAGRVQSVATRLVVERERKRMAFVPADYWDLSGTFARTDGEDAGTAFSARLSSVDG
KRVAGGRDFGDDGVLKGAADKLAHLDEQAARELAAGLEDAAFTVRSLETKPYTRRPAAPF
TTSTLQQEAARKLRFTSRTTMQVAQKLYENGYITYMRTDSVALSDQAVTAARRQATELYG
ADFVPGSPRLYSSKSKNAQEAHEAVRPAGDSFRAPNQVRGELSADAFRLYELIWKRTVAS
QMADAKGSTATVRLGATSSAGRDAEFSASGTVITFRGFLAAYEEGRDEDPATDKDGAKDG
DKRLPRMAEGDRLDATEVEADGHRTSPPPRYTEASLVKVLDELGIGRPSTYAATISTIMD
RGYVRVRGSALIPSWTAFSVVRLLEEHFSDYVDYDFTAEMEEGLDRIARGEEDSTDWLQD
FYFGSQGHENGLKPIVDDLGEIDARAVNSIPVTEDITLRVGKFGPYLEVAGAVDPETGEI
TGPIRANVPEDLAPDELTPDKARELIETGKADGRELGRDPVTGRAIVAKDGRYGPYVTEV
IPEPTAEELAAQPVEYYKNGKPKPPKKPVKEKPRTGSLLSTMTLQDVTLEDALKILSLPR
TLGTDAEGNEITVQNGRFGPYLKKGGDSRSLQSEEQLFTVTLDEALAIYAQPKQRGRGAA
KPPLADLGTDQITERPMVIKDGRFGPYITDGETNVTVPRGETVEQITPARASQLLAEKRA
QGPAPKKTARSTAKGTTTRSSTAKKSTAKKPAAAKPARAGSKG

NT seq 2832 nt +upstreamnt +downstreamnt
gtgccaacgaaggccacccagagcccgggaacgggcaagagcctgctcatcgtggagtcc
ccctccaaggtcaagaccatcgccgggtacctcggcgacgcctacgaggtcgagtcctcg
atggggcacatccgcgacctcccgcagccctcggagctgccggcggagctcaagaagggt
ccctacggcaagttcgcggtggacgtggagcacggcttcgagccgtactacgtggtgaac
ccggacaagaagaagaaggtcaccgagctccggcgcaagctcaaggacgcggacgccctc
tacctcgccaccgacggcgaccgcgagggggaggccatcgcgtggcacctcctggaggtg
ctcaagcccaagatccccgtctaccggctgaccttctccgagatcacccgcgaggccatc
gagcgggccttcggggagctgcgcgagctcgaccaggacctggtcgacgcgcaggagacc
cggcgcatcctcgaccggctctacggctacgagatctccccggtgctgtggcgcaagatc
gcctcgggcctgtccgccgggcgcgtgcagtccgtggccacccgcctggtcgtggagcgg
gagcgcaagcgcatggcattcgtgcccgccgactactgggacctcagcgggacgttcgcg
cgcaccgacggcgaggacgccggcaccgccttcagcgcccggctctcctccgtggacggc
aagcgggtggcgggcggccgcgacttcggcgacgacggagtgctcaagggcgccgcggac
aagctcgcgcacctggacgagcaggccgcccgcgaactggccgccggtctcgaggacgcg
gcgttcacggtccggtcgctggagaccaagccctacacacgccgcccggccgccccgttc
accacctccacgctgcagcaggaggcggcgcgcaagctgcgcttcacctcccgcaccacc
atgcaggtggcgcagaagctgtacgagaacggctacatcacctacatgcgcaccgactcc
gtggcgctgtccgaccaggcggtcacggccgcccggcgccaggccacggagctctacggc
gccgacttcgtgcccggctccccgcggctctacagctccaagtcgaagaacgcgcaggag
gcgcacgaggccgtgcgccccgcgggggactccttccgcgccccgaaccaggtccgcggc
gagctctccgcggacgcgttccggctctacgagctgatctggaagcgcaccgtggcctcc
cagatggccgatgccaaggggtcgacggcgaccgtccggctcggggcgacgtcctccgcc
ggccgggacgccgagttctccgcgtccggcaccgtcatcacgttccgcggcttcctggcc
gcctacgaggagggccgggacgaggaccccgccacggacaaggacggcgccaaggacggc
gacaagcggctcccgcggatggccgagggcgaccgcctggacgccaccgaggtcgaggcg
gacgggcaccgcacctcgccgccgccgcgctacaccgaggcgtccctcgtgaaggtcctc
gacgagctcggcatcggccggccctcgacctacgcggcgaccatctccacgatcatggac
cgcggctacgtccgcgtgcggggctccgcgctcatcccctcgtggaccgcgttctccgtg
gtgcgcctgctcgaggagcacttctccgactacgtggactacgacttcacggcggagatg
gaggagggcctcgaccggatcgcccgcggcgaggaggacagcaccgactggctgcaggac
ttctacttcggctcccagggccacgagaacgggctcaagcccatcgtcgacgacctcggc
gagatcgacgcccgcgccgtgaactccatccccgtgaccgaggacatcaccctgcgggtc
ggcaagttcggcccctacctggaggtggccggcgccgtcgacccggagaccggggagatc
accggcccgatccgggccaacgtgccggaggacctcgcccccgacgagctcacgcccgac
aaggcgcgcgagctcatcgagacgggcaaggccgacggccgggagctcggccgcgacccc
gtgaccgggcgcgccatcgtggccaaggacggccgctacgggccctacgtcaccgaggtg
atccccgagcccaccgccgaggagctcgcggcccagcccgtcgagtactacaagaacggc
aagcccaagcccccgaagaagccggtcaaggagaagccccgcacgggctccctgctctcc
acgatgacgctgcaggacgtgaccctcgaggacgcgctcaagatcctgtccctgccgcgc
acgctgggcacggacgccgagggcaacgagatcacggtgcagaacggccgcttcggcccc
tacctgaagaagggcggcgactcgcgctcactgcagtccgaggagcagctgttcacggtc
accctcgacgaggccctggcgatctacgcccagcccaagcagcgcggccgcggcgccgcc
aagcctccgctcgcggacctcggcaccgaccagatcacggaacggcccatggtcatcaag
gacgggcgcttcggcccctacatcaccgacggcgagaccaacgtgacggtcccgcgcggc
gagaccgtggagcagatcacgccggcgcgcgccagccagctgctcgcggagaagcgcgcc
cagggccccgccccgaagaagacggcccggtccacggccaaggggacgacgaccaggagc
agcacggcgaagaagagcacggccaagaagcccgcggcggccaagcccgcccgcgccggg
tccaagggctga

All links

Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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